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Community-developed checklists for publishing images and image analyses.
Schmied C, Nelson MS, Avilov S, Bakker GJ, Bertocchi C, Bischof J, Boehm U, Brocher J, Carvalho MT, Chiritescu C, Christopher J, Cimini BA, Conde-Sousa E, Ebner M, Ecker R, Eliceiri K, Fernandez-Rodriguez J, Gaudreault N, Gelman L, Grunwald D, Gu T, Halidi N, Hammer M, Hartley M, Held M, Jug F, Kapoor V, Koksoy AA, Lacoste J, Le Dévédec S, Le Guyader S, Liu P, Martins GG, Mathur A, Miura K, Montero Llopis P, Nitschke R, North A, Parslow AC, Payne-Dwyer A, Plantard L, Ali R, Schroth-Diez B, Schütz L, Scott RT, Seitz A, Selchow O, Sharma VP, Spitaler M, Srinivasan S, Strambio-De-Castillia C, Taatjes D, Tischer C, Jambor HK. Schmied C, et al. Among authors: eliceiri k. Nat Methods. 2024 Feb;21(2):170-181. doi: 10.1038/s41592-023-01987-9. Epub 2023 Sep 14. Nat Methods. 2024. PMID: 37710020 Review.
A call for bioimaging software usability.
Carpenter AE, Kamentsky L, Eliceiri KW. Carpenter AE, et al. Nat Methods. 2012 Jun 28;9(7):666-70. doi: 10.1038/nmeth.2073. Nat Methods. 2012. PMID: 22743771 Free PMC article.
Fiji: an open-source platform for biological-image analysis.
Schindelin J, Arganda-Carreras I, Frise E, Kaynig V, Longair M, Pietzsch T, Preibisch S, Rueden C, Saalfeld S, Schmid B, Tinevez JY, White DJ, Hartenstein V, Eliceiri K, Tomancak P, Cardona A. Schindelin J, et al. Among authors: eliceiri k. Nat Methods. 2012 Jun 28;9(7):676-82. doi: 10.1038/nmeth.2019. Nat Methods. 2012. PMID: 22743772 Free PMC article.
NIH Image to ImageJ: 25 years of image analysis.
Schneider CA, Rasband WS, Eliceiri KW. Schneider CA, et al. Nat Methods. 2012 Jul;9(7):671-5. doi: 10.1038/nmeth.2089. Nat Methods. 2012. PMID: 22930834 Free PMC article.
PyImageJ: A library for integrating ImageJ and Python.
Rueden CT, Hiner MC, Evans EL 3rd, Pinkert MA, Lucas AM, Carpenter AE, Cimini BA, Eliceiri KW. Rueden CT, et al. Nat Methods. 2022 Nov;19(11):1326-1327. doi: 10.1038/s41592-022-01655-4. Nat Methods. 2022. PMID: 36253645 Free PMC article. No abstract available.
297 results