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Data-analysis strategies for image-based cell profiling.
Caicedo JC, Cooper S, Heigwer F, Warchal S, Qiu P, Molnar C, Vasilevich AS, Barry JD, Bansal HS, Kraus O, Wawer M, Paavolainen L, Herrmann MD, Rohban M, Hung J, Hennig H, Concannon J, Smith I, Clemons PA, Singh S, Rees P, Horvath P, Linington RG, Carpenter AE. Caicedo JC, et al. Nat Methods. 2017 Aug 31;14(9):849-863. doi: 10.1038/nmeth.4397. Nat Methods. 2017. PMID: 28858338 Free PMC article.
Scanned image microscopy.
Smith IR, Sinclair DA. Smith IR, et al. Nature. 1980 Oct 16;287(5783):580-2. doi: 10.1038/287580a0. Nature. 1980. PMID: 7432477 No abstract available.
Lysosomal storage disease proteo/lipidomic profiling using nMOST links ferritinophagy with mitochondrial iron deficiencies in cells lacking NPC2.
Kraus F, He Y, Swarup S, Overmyer KA, Jiang Y, Brenner J, Capitanio C, Bieber A, Jen A, Nightingale NM, Anderson BJ, Lee C, Paulo JA, Smith IR, Plitzko JM, Schulman BA, Wilfling F, Coon JJ, Wade Harper J. Kraus F, et al. Among authors: smith ir. bioRxiv [Preprint]. 2024 Mar 27:2024.03.26.586828. doi: 10.1101/2024.03.26.586828. bioRxiv. 2024. PMID: 38585873 Free PMC article. Preprint.
Combinatorial selective ER-phagy remodels the ER during neurogenesis.
Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper JW. Hoyer MJ, et al. Among authors: smith ir. Nat Cell Biol. 2024 Mar;26(3):378-392. doi: 10.1038/s41556-024-01356-4. Epub 2024 Mar 1. Nat Cell Biol. 2024. PMID: 38429475 Free PMC article.
Combinatorial selective ER-phagy remodels the ER during neurogenesis.
Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper JW. Hoyer MJ, et al. Among authors: smith ir. bioRxiv [Preprint]. 2023 Nov 10:2023.06.26.546565. doi: 10.1101/2023.06.26.546565. bioRxiv. 2023. PMID: 37425907 Free PMC article. Updated. Preprint.
69 results