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pymgpipe: microbiome metabolic modeling in Python.
J Open Source Softw. 2023;8(88):5545. doi: 10.21105/joss.05545. Epub 2023 Aug 2.
J Open Source Softw. 2023.
PMID: 37885608
Free PMC article.
No abstract available.
Contamination source modeling with SCRuB improves cancer phenotype prediction from microbiome data.
Austin GI, Park H, Meydan Y, Seeram D, Sezin T, Lou YC, Firek BA, Morowitz MJ, Banfield JF, Christiano AM, Pe'er I, Uhlemann AC, Shenhav L, Korem T.
Austin GI, et al. Among authors: meydan y.
Nat Biotechnol. 2023 Dec;41(12):1820-1828. doi: 10.1038/s41587-023-01696-w. Epub 2023 Mar 16.
Nat Biotechnol. 2023.
PMID: 36928429
Free PMC article.
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Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome.
Kindschuh WF, Baldini F, Liu MC, Liao J, Meydan Y, Lee HH, Heinken A, Thiele I, Thaiss CA, Levy M, Korem T.
Kindschuh WF, et al. Among authors: meydan y.
Nat Microbiol. 2023 Feb;8(2):246-259. doi: 10.1038/s41564-022-01293-8. Epub 2023 Jan 12.
Nat Microbiol. 2023.
PMID: 36635575
Free PMC article.
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