Lee R - Search Results

1

Inferring bacterial transmission dynamics using deep sequencing genomic surveillance data.

Senghore M, Read H, Oza P, Johnson S, Passarelli-Araujo H, Taylor BP, Ashley S, Grey A, Callendrello A, Lee R, Goddard MR, Lumley T, Hanage WP, Wiles S. Senghore M, et al. Among authors: lee r. Nat Commun. 2023 Oct 31;14(1):6397. doi: 10.1038/s41467-023-42211-8. Nat Commun. 2023. PMID: 37907520 Free PMC article.

2

Previously undetected super-spreading of Mycobacterium tuberculosis revealed by deep sequencing.

Lee RS, Proulx JF, McIntosh F, Behr MA, Hanage WP. Lee RS, et al. Elife. 2020 Feb 4;9:e53245. doi: 10.7554/eLife.53245. Elife. 2020. PMID: 32014110 Free PMC article.

3

Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing.

Břinda K, Callendrello A, Ma KC, MacFadden DR, Charalampous T, Lee RS, Cowley L, Wadsworth CB, Grad YH, Kucherov G, O'Grady J, Baym M, Hanage WP. Břinda K, et al. Among authors: lee rs. Nat Microbiol. 2020 Mar;5(3):455-464. doi: 10.1038/s41564-019-0656-6. Epub 2020 Feb 10. Nat Microbiol. 2020. PMID: 32042129 Free PMC article.

4

Within-host Mycobacterium tuberculosis diversity and its utility for inferences of transmission.

Martin MA, Lee RS, Cowley LA, Gardy JL, Hanage WP. Martin MA, et al. Microb Genom. 2018 Oct;4(10):e000217. doi: 10.1099/mgen.0.000217. Epub 2018 Oct 11. Microb Genom. 2018. PMID: 30303479 Free PMC article.

5

Reproducibility in science: important or incremental?

Lee RS, Hanage WP. Lee RS, et al. Lancet Microbe. 2020 Jun;1(2):e59-60. doi: 10.1016/S2666-5247(20)30028-8. Epub 2020 May 14. Lancet Microbe. 2020. PMID: 32835329 Free PMC article. No abstract available.

6

Using Genetic Distance from Archived Samples for the Prediction of Antibiotic Resistance in Escherichia coli.

MacFadden DR, Coburn B, Břinda K, Corbeil A, Daneman N, Fisman D, Lee RS, Lipsitch M, McGeer A, Melano RG, Mubareka S, Hanage WP. MacFadden DR, et al. Among authors: lee rs. Antimicrob Agents Chemother. 2020 Apr 21;64(5):e02417-19. doi: 10.1128/AAC.02417-19. Print 2020 Apr 21. Antimicrob Agents Chemother. 2020. PMID: 32152083 Free PMC article.

7

The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study.

Lee RS, Gonçalves da Silva A, Baines SL, Strachan J, Ballard S, Carter GP, Kwong JC, Schultz MB, Bulach DM, Seemann T, Stinear TP, Howden BP. Lee RS, et al. J Antimicrob Chemother. 2018 Dec 1;73(12):3268-3278. doi: 10.1093/jac/dky331. J Antimicrob Chemother. 2018. PMID: 30189014

8

Estimating the relative probability of direct transmission between infectious disease patients.

Leavitt SV, Lee RS, Sebastiani P, Horsburgh CR, Jenkins HE, White LF. Leavitt SV, et al. Int J Epidemiol. 2020 Jun 1;49(3):764-775. doi: 10.1093/ije/dyaa031. Int J Epidemiol. 2020. PMID: 32211747 Free PMC article.

9

Genomic epidemiology of Mycobacterium abscessus in a Canadian cystic fibrosis centre.

Waglechner N, Tullis E, Stephenson AL, Waters V, McIntosh F, Ma J, Jamieson FB, Behr MA, Batt J, Lee RS. Waglechner N, et al. Sci Rep. 2022 Sep 27;12(1):16116. doi: 10.1038/s41598-022-19666-8. Sci Rep. 2022. PMID: 36167715 Free PMC article.

10

What Can Genetic Relatedness Tell Us About Risk Factors for Tuberculosis Transmission?

Leavitt SV, Horsburgh CR Jr, Lee RS, Tibbs AM, White LF, Jenkins HE. Leavitt SV, et al. Epidemiology. 2022 Jan 1;33(1):55-64. doi: 10.1097/EDE.0000000000001414. Epidemiology. 2022. PMID: 34847084 Free PMC article.

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