Crook D - Search Results

1

Deep learning and single-cell phenotyping for rapid antimicrobial susceptibility detection in Escherichia coli.

Zagajewski A, Turner P, Feehily C, El Sayyed H, Andersson M, Barrett L, Oakley S, Stracy M, Crook D, Nellåker C, Stoesser N, Kapanidis AN. Zagajewski A, et al. Among authors: crook d. Commun Biol. 2023 Nov 14;6(1):1164. doi: 10.1038/s42003-023-05524-4. Commun Biol. 2023. PMID: 37964031 Free PMC article.

2

Virus Detection and Identification in Minutes Using Single-Particle Imaging and Deep Learning.

Shiaelis N, Tometzki A, Peto L, McMahon A, Hepp C, Bickerton E, Favard C, Muriaux D, Andersson M, Oakley S, Vaughan A, Matthews PC, Stoesser N, Crook DW, Kapanidis AN, Robb NC. Shiaelis N, et al. Among authors: crook dw. ACS Nano. 2023 Jan 10;17(1):697-710. doi: 10.1021/acsnano.2c10159. Epub 2022 Dec 21. ACS Nano. 2023. PMID: 36541630 Free PMC article.

3

Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.

Sanderson ND, Kapel N, Rodger G, Webster H, Lipworth S, Street TL, Peto T, Crook D, Stoesser N. Sanderson ND, et al. Among authors: crook d. Microb Genom. 2023 Jan;9(1):mgen000910. doi: 10.1099/mgen.0.000910. Microb Genom. 2023. PMID: 36748454 Free PMC article.

4

A longitudinal study reveals persistence of antimicrobial resistance on livestock farms is not due to antimicrobial usage alone.

Smith RP, May HE, AbuOun M, Stubberfield E, Gilson D, Chau KK, Crook DW, Shaw LP, Read DS, Stoesser N, Vilar MJ, Anjum MF. Smith RP, et al. Among authors: crook dw. Front Microbiol. 2023 Mar 14;14:1070340. doi: 10.3389/fmicb.2023.1070340. eCollection 2023. Front Microbiol. 2023. PMID: 36998408 Free PMC article.

5

High-resolution characterization of short-term temporal variability in the taxonomic and resistome composition of wastewater influent.

Chau KK, Goodall T, Bowes M, Easterbrook K, Brett H, Hughes J, Crook DW, Read DS, Walker AS, Stoesser N. Chau KK, et al. Among authors: crook dw. Microb Genom. 2023 May;9(5):mgen000983. doi: 10.1099/mgen.0.000983. Microb Genom. 2023. PMID: 37145848 Free PMC article.

6

Evaluation of sequence hybridization for respiratory viruses using the Twist Bioscience Respiratory Virus Research panel and the OneCodex Respiratory Virus sequence analysis workflow.

Kapel N, Kalimeris E, Lumley S, Decano A, Rodger G, Lopes Alves M, Dingle K, Oakley S, Barrett L, Barnett S, Crook D, Eyre DW, Matthews PC, Street T, Stoesser N. Kapel N, et al. Among authors: crook d. Microb Genom. 2023 Sep;9(9):001103. doi: 10.1099/mgen.0.001103. Microb Genom. 2023. PMID: 37676707 Free PMC article.

7

Discordance between different bioinformatic methods for identifying resistance genes from short-read genomic data, with a focus on Escherichia coli.

Davies TJ, Swann J, Sheppard AE, Pickford H, Lipworth S, AbuOun M, Ellington MJ, Fowler PW, Hopkins S, Hopkins KL, Crook DW, Peto TEA, Anjum MF, Walker AS, Stoesser N. Davies TJ, et al. Microb Genom. 2023 Dec;9(12):001151. doi: 10.1099/mgen.0.001151. Microb Genom. 2023. PMID: 38100178 Free PMC article.

8

Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers.

Lumley SF, O'Donnell D, Stoesser NE, Matthews PC, Howarth A, Hatch SB, Marsden BD, Cox S, James T, Warren F, Peck LJ, Ritter TG, de Toledo Z, Warren L, Axten D, Cornall RJ, Jones EY, Stuart DI, Screaton G, Ebner D, Hoosdally S, Chand M, Crook DW, O'Donnell AM, Conlon CP, Pouwels KB, Walker AS, Peto TEA, Hopkins S, Walker TM, Jeffery K, Eyre DW; Oxford University Hospitals Staff Testing Group. Lumley SF, et al. Among authors: crook dw. N Engl J Med. 2021 Feb 11;384(6):533-540. doi: 10.1056/NEJMoa2034545. Epub 2020 Dec 23. N Engl J Med. 2021. PMID: 33369366 Free PMC article.

9

Erratum: Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.

Sanderson ND, Kapel N, Rodger G, Webster H, Lipworth S, Street TL, Peto T, Crook D, Stoesser N. Sanderson ND, et al. Among authors: crook d. Microb Genom. 2023 Nov;9(11):001144. doi: 10.1099/mgen.0.001144. Microb Genom. 2023. PMID: 38015200 Free PMC article. No abstract available.

10

Penicillin Binding Protein Substitutions Cooccur with Fluoroquinolone Resistance in Epidemic Lineages of Multidrug-Resistant Clostridioides difficile.

Dingle KE, Freeman J, Didelot X, Quan TP, Eyre DW, Swann J, Spittal WD, Clark EV, Jolley KA, Walker AS, Wilcox MH, Crook DW. Dingle KE, et al. Among authors: crook dw. mBio. 2023 Apr 25;14(2):e0024323. doi: 10.1128/mbio.00243-23. Epub 2023 Apr 5. mBio. 2023. PMID: 37017518 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

697 results

Search Page