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Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany.
PLoS Comput Biol. 2023 Nov 27;19(11):e1011653. doi: 10.1371/journal.pcbi.1011653. eCollection 2023 Nov.
PLoS Comput Biol. 2023.
PMID: 38011276
Free PMC article.
PyMC: a modern, and comprehensive probabilistic programming framework in Python.
Abril-Pla O, Andreani V, Carroll C, Dong L, Fonnesbeck CJ, Kochurov M, Kumar R, Lao J, Luhmann CC, Martin OA, Osthege M, Vieira R, Wiecki T, Zinkov R.
Abril-Pla O, et al. Among authors: osthege m.
PeerJ Comput Sci. 2023 Sep 1;9:e1516. doi: 10.7717/peerj-cs.1516. eCollection 2023.
PeerJ Comput Sci. 2023.
PMID: 37705656
Free PMC article.
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Experimental kS estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale.
Steinhoff H, Finger M, Osthege M, Golze C, Schito S, Noack S, Büchs J, Grünberger A.
Steinhoff H, et al. Among authors: osthege m.
Biotechnol Bioeng. 2023 May;120(5):1288-1302. doi: 10.1002/bit.28345. Epub 2023 Mar 1.
Biotechnol Bioeng. 2023.
PMID: 36740737
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Control of parallelized bioreactors II: probabilistic quantification of carboxylic acid reductase activity for bioprocess optimization.
von den Eichen N, Osthege M, Dölle M, Bromig L, Wiechert W, Oldiges M, Weuster-Botz D.
von den Eichen N, et al. Among authors: osthege m.
Bioprocess Biosyst Eng. 2022 Dec;45(12):1939-1954. doi: 10.1007/s00449-022-02797-7. Epub 2022 Oct 28.
Bioprocess Biosyst Eng. 2022.
PMID: 36307614
Free PMC article.
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Explore or exploit? A model-based screening strategy for PETase secretion by Corynebacterium glutamicum.
Helleckes LM, Müller C, Griesbach T, Waffenschmidt V, Moch M, Osthege M, Wiechert W, Oldiges M.
Helleckes LM, et al. Among authors: osthege m.
Biotechnol Bioeng. 2023 Jan;120(1):139-153. doi: 10.1002/bit.28261. Epub 2022 Nov 11.
Biotechnol Bioeng. 2023.
PMID: 36225165
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bletl - A Python package for integrating BioLector microcultivation devices in the Design-Build-Test-Learn cycle.
Osthege M, Tenhaef N, Zyla R, Müller C, Hemmerich J, Wiechert W, Noack S, Oldiges M.
Osthege M, et al.
Eng Life Sci. 2022 Mar 1;22(3-4):242-259. doi: 10.1002/elsc.202100108. eCollection 2022 Mar.
Eng Life Sci. 2022.
PMID: 35382539
Free PMC article.
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Bayesian calibration, process modeling and uncertainty quantification in biotechnology.
Helleckes LM, Osthege M, Wiechert W, von Lieres E, Oldiges M.
Helleckes LM, et al. Among authors: osthege m.
PLoS Comput Biol. 2022 Mar 7;18(3):e1009223. doi: 10.1371/journal.pcbi.1009223. eCollection 2022 Mar.
PLoS Comput Biol. 2022.
PMID: 35255090
Free PMC article.
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