Thomson JA - Search Results

1

Chromosome level genome assembly of the Etruscan shrew Suncus etruscus.

Bukhman YV, Meyer S, Chu LF, Abueg L, Antosiewicz-Bourget J, Balacco J, Brecht M, Dinatale E, Fedrigo O, Formenti G, Fungtammasan A, Giri SJ, Hiller M, Howe K, Kihara D, Mamott D, Mountcastle J, Pelan S, Rabbani K, Sims Y, Tracey A, Wood JMD, Jarvis ED, Thomson JA, Chaisson MJP, Stewart R. Bukhman YV, et al. Among authors: thomson ja. Sci Data. 2024 Feb 7;11(1):176. doi: 10.1038/s41597-024-03011-x. Sci Data. 2024. PMID: 38326333 Free PMC article.

2

Induced pluripotent stem cell lines derived from human somatic cells.

Yu J, Vodyanik MA, Smuga-Otto K, Antosiewicz-Bourget J, Frane JL, Tian S, Nie J, Jonsdottir GA, Ruotti V, Stewart R, Slukvin II, Thomson JA. Yu J, et al. Among authors: thomson ja. Science. 2007 Dec 21;318(5858):1917-20. doi: 10.1126/science.1151526. Epub 2007 Nov 20. Science. 2007. PMID: 18029452

3

NANOG is a direct target of TGFbeta/activin-mediated SMAD signaling in human ESCs.

Xu RH, Sampsell-Barron TL, Gu F, Root S, Peck RM, Pan G, Yu J, Antosiewicz-Bourget J, Tian S, Stewart R, Thomson JA. Xu RH, et al. Among authors: thomson ja. Cell Stem Cell. 2008 Aug 7;3(2):196-206. doi: 10.1016/j.stem.2008.07.001. Cell Stem Cell. 2008. PMID: 18682241 Free PMC article.

4

Human induced pluripotent stem cells free of vector and transgene sequences.

Yu J, Hu K, Smuga-Otto K, Tian S, Stewart R, Slukvin II, Thomson JA. Yu J, et al. Among authors: thomson ja. Science. 2009 May 8;324(5928):797-801. doi: 10.1126/science.1172482. Epub 2009 Mar 26. Science. 2009. PMID: 19325077 Free PMC article.

5

MicroRNA 92b controls the G1/S checkpoint gene p57 in human embryonic stem cells.

Sengupta S, Nie J, Wagner RJ, Yang C, Stewart R, Thomson JA. Sengupta S, et al. Among authors: thomson ja. Stem Cells. 2009 Jul;27(7):1524-8. doi: 10.1002/stem.84. Stem Cells. 2009. PMID: 19544458

6

RNA-Seq gene expression estimation with read mapping uncertainty.

Li B, Ruotti V, Stewart RM, Thomson JA, Dewey CN. Li B, et al. Among authors: thomson ja. Bioinformatics. 2010 Feb 15;26(4):493-500. doi: 10.1093/bioinformatics/btp692. Epub 2009 Dec 18. Bioinformatics. 2010. PMID: 20022975 Free PMC article.

7

A mesoderm-derived precursor for mesenchymal stem and endothelial cells.

Vodyanik MA, Yu J, Zhang X, Tian S, Stewart R, Thomson JA, Slukvin II. Vodyanik MA, et al. Among authors: thomson ja. Cell Stem Cell. 2010 Dec 3;7(6):718-29. doi: 10.1016/j.stem.2010.11.011. Cell Stem Cell. 2010. PMID: 21112566 Free PMC article.

8

TF-Cluster: a pipeline for identifying functionally coordinated transcription factors via network decomposition of the shared coexpression connectivity matrix (SCCM).

Nie J, Stewart R, Zhang H, Thomson JA, Ruan F, Cui X, Wei H. Nie J, et al. Among authors: thomson ja. BMC Syst Biol. 2011 Apr 15;5:53. doi: 10.1186/1752-0509-5-53. BMC Syst Biol. 2011. PMID: 21496241 Free PMC article.

9

Single read and paired end mRNA-Seq Illumina libraries from 10 nanograms total RNA.

Sengupta S, Bolin JM, Ruotti V, Nguyen BK, Thomson JA, Elwell AL, Stewart R. Sengupta S, et al. Among authors: thomson ja. J Vis Exp. 2011 Oct 27;(56):e3340. doi: 10.3791/3340. J Vis Exp. 2011. PMID: 22064688 Free PMC article.

10

Protein kinase C mediated extraembryonic endoderm differentiation of human embryonic stem cells.

Feng X, Zhang J, Smuga-Otto K, Tian S, Yu J, Stewart R, Thomson JA. Feng X, et al. Among authors: thomson ja. Stem Cells. 2012 Mar;30(3):461-70. doi: 10.1002/stem.1018. Stem Cells. 2012. PMID: 22213079 Free PMC article.

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