Gultyaev AP - Search Results

1

Transient RNA structures underlie highly pathogenic avian influenza virus genesis.

Funk M, Spronken MI, Bestebroer TM, de Bruin ACM, Gultyaev AP, Fouchier RAM, Te Velthuis AJW, Richard M. Funk M, et al. Among authors: gultyaev ap. bioRxiv [Preprint]. 2024 Jan 11:2024.01.11.574333. doi: 10.1101/2024.01.11.574333. bioRxiv. 2024. PMID: 38370829 Free PMC article. Preprint.

2

Conserved structured domains in plant non-coding RNA enod40, their evolution and recruitment of sequences from transposable elements.

Gultyaev AP, Koster C, van Batenburg DC, Sistermans T, van Belle N, Vijfvinkel D, Roussis A. Gultyaev AP, et al. NAR Genom Bioinform. 2023 Oct 16;5(4):lqad091. doi: 10.1093/nargab/lqad091. eCollection 2023 Dec. NAR Genom Bioinform. 2023. PMID: 37850034 Free PMC article.

3

Hemagglutinin Subtype Specificity and Mechanisms of Highly Pathogenic Avian Influenza Virus Genesis.

de Bruin ACM, Funk M, Spronken MI, Gultyaev AP, Fouchier RAM, Richard M. de Bruin ACM, et al. Among authors: gultyaev ap. Viruses. 2022 Jul 19;14(7):1566. doi: 10.3390/v14071566. Viruses. 2022. PMID: 35891546 Free PMC article. Review.

4

In Silico Analyses of the Role of Codon Usage at the Hemagglutinin Cleavage Site in Highly Pathogenic Avian Influenza Genesis.

Funk M, de Bruin ACM, Spronken MI, Gultyaev AP, Richard M. Funk M, et al. Among authors: gultyaev ap. Viruses. 2022 Jun 21;14(7):1352. doi: 10.3390/v14071352. Viruses. 2022. PMID: 35891333 Free PMC article.

5

All genera of Flaviviridae host a conserved Xrn1-resistant RNA motif.

Dilweg IW, Savina A, Köthe S, Gultyaev AP, Bredenbeek PJ, Olsthoorn RCL. Dilweg IW, et al. Among authors: gultyaev ap. RNA Biol. 2021 Dec;18(12):2321-2329. doi: 10.1080/15476286.2021.1907044. Epub 2021 Apr 16. RNA Biol. 2021. PMID: 33858294 Free PMC article.

6

Insertions of codons encoding basic amino acids in H7 hemagglutinins of influenza A viruses occur by recombination with RNA at hotspots near snoRNA binding sites.

Gultyaev AP, Spronken MI, Funk M, Fouchier RAM, Richard M. Gultyaev AP, et al. RNA. 2021 Feb;27(2):123-132. doi: 10.1261/rna.077495.120. Epub 2020 Nov 13. RNA. 2021. PMID: 33188057 Free PMC article.

7

Xrn1-resistant RNA structures are well-conserved within the genus flavivirus.

Dilweg IW, Bouabda A, Dalebout T, Gultyaev AP, Bredenbeek PJ, Olsthoorn RCL. Dilweg IW, et al. Among authors: gultyaev ap. RNA Biol. 2021 May;18(5):709-717. doi: 10.1080/15476286.2020.1830238. Epub 2020 Oct 16. RNA Biol. 2021. PMID: 33064973 Free PMC article.

8

A database of flavivirus RNA structures with a search algorithm for pseudoknots and triple base interactions.

Zammit A, Helwerda L, Olsthoorn RCL, Verbeek FJ, Gultyaev AP. Zammit A, et al. Among authors: gultyaev ap. Bioinformatics. 2021 May 17;37(7):956-962. doi: 10.1093/bioinformatics/btaa759. Bioinformatics. 2021. PMID: 32866223 Free PMC article.

9

Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB).

Martorelli I, Helwerda LS, Kerkvliet J, Gomes SIF, Nuytinck J, van der Werff CRA, Ramackers GJ, Gultyaev AP, Merckx VSFT, Verbeek FJ. Martorelli I, et al. Among authors: gultyaev ap. J Integr Bioinform. 2020 May 28;17(1):20190046. doi: 10.1515/jib-2019-0046. J Integr Bioinform. 2020. PMID: 32463383 Free PMC article.

10

Conserved structural RNA domains in regions coding for cleavage site motifs in hemagglutinin genes of influenza viruses.

Gultyaev AP, Richard M, Spronken MI, Olsthoorn RCL, Fouchier RAM. Gultyaev AP, et al. Virus Evol. 2019 Aug 21;5(2):vez034. doi: 10.1093/ve/vez034. eCollection 2019 Jul. Virus Evol. 2019. PMID: 31456885 Free PMC article.

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