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Author Correction: Regression-based Deep-Learning predicts molecular biomarkers from pathology slides.
El Nahhas OSM, Loeffler CML, Carrero ZI, van Treeck M, Kolbinger FR, Hewitt KJ, Muti HS, Graziani M, Zeng Q, Calderaro J, Ortiz-Brüchle N, Yuan T, Hoffmeister M, Brenner H, Brobeil A, Reis-Filho JS, Kather JN. El Nahhas OSM, et al. Among authors: brobeil a. Nat Commun. 2024 Feb 29;15(1):1868. doi: 10.1038/s41467-024-46298-5. Nat Commun. 2024. PMID: 38424093 Free PMC article. No abstract available.
Regression-based Deep-Learning predicts molecular biomarkers from pathology slides.
El Nahhas OSM, Loeffler CML, Carrero ZI, van Treeck M, Kolbinger FR, Hewitt KJ, Muti HS, Graziani M, Zeng Q, Calderaro J, Ortiz-Brüchle N, Yuan T, Hoffmeister M, Brenner H, Brobeil A, Reis-Filho JS, Kather JN. El Nahhas OSM, et al. Among authors: brobeil a. Nat Commun. 2024 Feb 10;15(1):1253. doi: 10.1038/s41467-024-45589-1. Nat Commun. 2024. PMID: 38341402 Free PMC article.
Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.
Niehues JM, Quirke P, West NP, Grabsch HI, van Treeck M, Schirris Y, Veldhuizen GP, Hutchins GGA, Richman SD, Foersch S, Brinker TJ, Fukuoka J, Bychkov A, Uegami W, Truhn D, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Niehues JM, et al. Among authors: brobeil a. Cell Rep Med. 2023 Apr 18;4(4):100980. doi: 10.1016/j.xcrm.2023.100980. Epub 2023 Mar 22. Cell Rep Med. 2023. PMID: 36958327 Free PMC article.
Automated curation of large-scale cancer histopathology image datasets using deep learning.
Hilgers L, Ghaffari Laleh N, West NP, Westwood A, Hewitt KJ, Quirke P, Grabsch HI, Carrero ZI, Matthaei E, Loeffler CML, Brinker TJ, Yuan T, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Hilgers L, et al. Among authors: brobeil a. Histopathology. 2024 Jun;84(7):1139-1153. doi: 10.1111/his.15159. Epub 2024 Feb 26. Histopathology. 2024. PMID: 38409878
End-to-end prognostication in colorectal cancer by deep learning: a retrospective, multicentre study.
Jiang X, Hoffmeister M, Brenner H, Muti HS, Yuan T, Foersch S, West NP, Brobeil A, Jonnagaddala J, Hawkins N, Ward RL, Brinker TJ, Saldanha OL, Ke J, Müller W, Grabsch HI, Quirke P, Truhn D, Kather JN. Jiang X, et al. Among authors: brobeil a. Lancet Digit Health. 2024 Jan;6(1):e33-e43. doi: 10.1016/S2589-7500(23)00208-X. Lancet Digit Health. 2024. PMID: 38123254 Free article.
CpG-biomarkers in tumor tissue and prediction models for the survival of colorectal cancer: A systematic review and external validation study.
Yuan T, Edelmann D, Kather JN, Fan Z, Tagscherer KE, Roth W, Bewerunge-Hudler M, Brobeil A, Kloor M, Bläker H, Burwinkel B, Brenner H, Hoffmeister M. Yuan T, et al. Among authors: brobeil a. Crit Rev Oncol Hematol. 2024 Jan;193:104199. doi: 10.1016/j.critrevonc.2023.104199. Epub 2023 Nov 11. Crit Rev Oncol Hematol. 2024. PMID: 37952858 Review.
Validation of the prognostic value of CD3 and CD8 cell densities analogous to the Immunoscore® by stage and location of colorectal cancer: an independent patient cohort study.
Alwers E, Kather JN, Kloor M, Brobeil A, Tagscherer KE, Roth W, Echle A, Amitay EL, Chang-Claude J, Brenner H, Hoffmeister M. Alwers E, et al. Among authors: brobeil a. J Pathol Clin Res. 2023 Mar;9(2):129-136. doi: 10.1002/cjp2.304. Epub 2022 Nov 24. J Pathol Clin Res. 2023. PMID: 36424650 Free PMC article.
Encrypted federated learning for secure decentralized collaboration in cancer image analysis.
Truhn D, Tayebi Arasteh S, Saldanha OL, Müller-Franzes G, Khader F, Quirke P, West NP, Gray R, Hutchins GGA, James JA, Loughrey MB, Salto-Tellez M, Brenner H, Brobeil A, Yuan T, Chang-Claude J, Hoffmeister M, Foersch S, Han T, Keil S, Schulze-Hagen M, Isfort P, Bruners P, Kaissis G, Kuhl C, Nebelung S, Kather JN. Truhn D, et al. Among authors: brobeil a. Med Image Anal. 2024 Feb;92:103059. doi: 10.1016/j.media.2023.103059. Epub 2023 Dec 7. Med Image Anal. 2024. PMID: 38104402 Free PMC article.
Deep Learning-Enabled Diagnosis of Liver Adenocarcinoma.
Albrecht T, Rossberg A, Albrecht JD, Nicolay JP, Straub BK, Gerber TS, Albrecht M, Brinkmann F, Charbel A, Schwab C, Schreck J, Brobeil A, Flechtenmacher C, von Winterfeld M, Köhler BC, Springfeld C, Mehrabi A, Singer S, Vogel MN, Neumann O, Stenzinger A, Schirmacher P, Weis CA, Roessler S, Kather JN, Goeppert B. Albrecht T, et al. Among authors: brobeil a. Gastroenterology. 2023 Nov;165(5):1262-1275. doi: 10.1053/j.gastro.2023.07.026. Epub 2023 Aug 9. Gastroenterology. 2023. PMID: 37562657
Bovine meat and milk factor protein expression in tumor-free mucosa of colorectal cancer patients coincides with macrophages and might interfere with patient survival.
Nikitina E, Burk-Körner A, Wiesenfarth M, Alwers E, Heide D, Tessmer C, Ernst C, Krunic D, Schrotz-King P, Chang-Claude J, von Winterfeld M, Herpel E, Brobeil A, Brenner H, Heikenwalder M, Hoffmeister M, Kopp-Schneider A, Bund T. Nikitina E, et al. Among authors: brobeil a. Mol Oncol. 2024 May;18(5):1076-1092. doi: 10.1002/1878-0261.13390. Epub 2023 Feb 22. Mol Oncol. 2024. PMID: 36811271 Free PMC article.
95 results