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Page 1
Deep learning for dual detection of microsatellite instability and POLE mutations in colorectal cancer histopathology.
Gustav M, Reitsam NG, Carrero ZI, Loeffler CML, van Treeck M, Yuan T, West NP, Quirke P, Brinker TJ, Brenner H, Favre L, Märkl B, Stenzinger A, Brobeil A, Hoffmeister M, Calderaro J, Pujals A, Kather JN. Gustav M, et al. Among authors: van treeck m. NPJ Precis Oncol. 2024 May 23;8(1):115. doi: 10.1038/s41698-024-00592-z. NPJ Precis Oncol. 2024. PMID: 38783059
Author Correction: Regression-based Deep-Learning predicts molecular biomarkers from pathology slides.
El Nahhas OSM, Loeffler CML, Carrero ZI, van Treeck M, Kolbinger FR, Hewitt KJ, Muti HS, Graziani M, Zeng Q, Calderaro J, Ortiz-Brüchle N, Yuan T, Hoffmeister M, Brenner H, Brobeil A, Reis-Filho JS, Kather JN. El Nahhas OSM, et al. Among authors: van treeck m. Nat Commun. 2024 Feb 29;15(1):1868. doi: 10.1038/s41467-024-46298-5. Nat Commun. 2024. PMID: 38424093 Free PMC article. No abstract available.
Regression-based Deep-Learning predicts molecular biomarkers from pathology slides.
El Nahhas OSM, Loeffler CML, Carrero ZI, van Treeck M, Kolbinger FR, Hewitt KJ, Muti HS, Graziani M, Zeng Q, Calderaro J, Ortiz-Brüchle N, Yuan T, Hoffmeister M, Brenner H, Brobeil A, Reis-Filho JS, Kather JN. El Nahhas OSM, et al. Among authors: van treeck m. Nat Commun. 2024 Feb 10;15(1):1253. doi: 10.1038/s41467-024-45589-1. Nat Commun. 2024. PMID: 38341402 Free PMC article.
Direct image to subtype prediction for brain tumors using deep learning.
Hewitt KJ, Löffler CML, Muti HS, Berghoff AS, Eisenlöffel C, van Treeck M, Carrero ZI, El Nahhas OSM, Veldhuizen GP, Weil S, Saldanha OL, Bejan L, Millner TO, Brandner S, Brückmann S, Kather JN. Hewitt KJ, et al. Among authors: van treeck m. Neurooncol Adv. 2023 Nov 1;5(1):vdad139. doi: 10.1093/noajnl/vdad139. eCollection 2023 Jan-Dec. Neurooncol Adv. 2023. PMID: 38106649 Free PMC article.
Prediction models for hormone receptor status in female breast cancer do not extend to males: further evidence of sex-based disparity in breast cancer.
Chatterji S, Niehues JM, van Treeck M, Loeffler CML, Saldanha OL, Veldhuizen GP, Cifci D, Carrero ZI, Abu-Eid R, Speirs V, Kather JN. Chatterji S, et al. Among authors: van treeck m. NPJ Breast Cancer. 2023 Nov 8;9(1):91. doi: 10.1038/s41523-023-00599-y. NPJ Breast Cancer. 2023. PMID: 37940649 Free PMC article.
Prediction of heart transplant rejection from routine pathology slides with self-supervised deep learning.
Seraphin TP, Luedde M, Roderburg C, van Treeck M, Scheider P, Buelow RD, Boor P, Loosen SH, Provaznik Z, Mendelsohn D, Berisha F, Magnussen C, Westermann D, Luedde T, Brochhausen C, Sossalla S, Kather JN. Seraphin TP, et al. Among authors: van treeck m. Eur Heart J Digit Health. 2023 Mar 2;4(3):265-274. doi: 10.1093/ehjdh/ztad016. eCollection 2023 May. Eur Heart J Digit Health. 2023. PMID: 37265858 Free PMC article.
Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.
Niehues JM, Quirke P, West NP, Grabsch HI, van Treeck M, Schirris Y, Veldhuizen GP, Hutchins GGA, Richman SD, Foersch S, Brinker TJ, Fukuoka J, Bychkov A, Uegami W, Truhn D, Brenner H, Brobeil A, Hoffmeister M, Kather JN. Niehues JM, et al. Among authors: van treeck m. Cell Rep Med. 2023 Apr 18;4(4):100980. doi: 10.1016/j.xcrm.2023.100980. Epub 2023 Mar 22. Cell Rep Med. 2023. PMID: 36958327 Free PMC article.
Direct prediction of Homologous Recombination Deficiency from routine histology in ten different tumor types with attention-based Multiple Instance Learning: a development and validation study.
Loeffler CML, El Nahhas OSM, Muti HS, Seibel T, Cifci D, van Treeck M, Gustav M, Carrero ZI, Gaisa NT, Lehmann KV, Leary A, Selenica P, Reis-Filho JS, Bruechle NO, Kather JN. Loeffler CML, et al. Among authors: van treeck m. medRxiv [Preprint]. 2023 Mar 10:2023.03.08.23286975. doi: 10.1101/2023.03.08.23286975. medRxiv. 2023. PMID: 36945540 Free PMC article. Preprint.
Direct prediction of genetic aberrations from pathology images in gastric cancer with swarm learning.
Saldanha OL, Muti HS, Grabsch HI, Langer R, Dislich B, Kohlruss M, Keller G, van Treeck M, Hewitt KJ, Kolbinger FR, Veldhuizen GP, Boor P, Foersch S, Truhn D, Kather JN. Saldanha OL, et al. Among authors: van treeck m. Gastric Cancer. 2023 Mar;26(2):264-274. doi: 10.1007/s10120-022-01347-0. Epub 2022 Oct 20. Gastric Cancer. 2023. PMID: 36264524 Free PMC article.
14 results