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How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort.
Wegner F, Cabrera-Gil B, Tanguy A, Beckmann C, Beerenwinkel N, Bertelli C, Carrara M, Cerutti L, Chen C, Cordey S, Dumoulin A, du Plessis L, Friedli M, Gerth Y, Greub G, Härri A, Hirsch H, Howald C, Huber M, Imhof A, Kaiser L, Kufner V, Leib SL, Leuzinger K, Lleshi E, Martinetti G, Mäusezahl M, Moraz M, Neher R, Nolte O, Ramette A, Redondo M, Risch L, Rohner L, Roloff T, Schläepfer P, Schneider K, Singer F, Spina V, Stadler T, Studer E, Topolsky I, Trkola A, Walther D, Wohlwend N, Zehnder C, Neves A, Egli A; SPSP consortium. Wegner F, et al. Among authors: martinetti g. Microbiol Spectr. 2024 May 2;12(5):e0362823. doi: 10.1128/spectrum.03628-23. Epub 2024 Mar 18. Microbiol Spectr. 2024. PMID: 38497714 Free PMC article.
The Cumulative Impact of Harm Reduction on the Swiss HIV Epidemic: Cohort Study, Mathematical Model, and Phylogenetic Analysis.
Marzel A, Kusejko K, Weber R, Bruggmann P, Rauch A, Roth JA, Bernasconi E, Calmy A, Cavassini M, Hoffmann M, Böni J, Yerly S, Klimkait T, Perreau M, Günthard HF, Kouyos RD; Swiss HIV Cohort Study. Marzel A, et al. Open Forum Infect Dis. 2018 May 19;5(5):ofy078. doi: 10.1093/ofid/ofy078. eCollection 2018 May. Open Forum Infect Dis. 2018. PMID: 29868622 Free PMC article.
Chemsex drugs on the rise: a longitudinal analysis of the Swiss HIV Cohort Study from 2007 to 2017.
Hampel B, Kusejko K, Kouyos RD, Böni J, Flepp M, Stöckle M, Conen A, Béguelin C, Künzler-Heule P, Nicca D, Schmidt AJ, Nguyen H, Delaloye J, Rougemont M, Bernasconi E, Rauch A, Günthard HF, Braun DL, Fehr J; Swiss HIV Cohort Study group. Hampel B, et al. HIV Med. 2020 Apr;21(4):228-239. doi: 10.1111/hiv.12821. Epub 2019 Dec 18. HIV Med. 2020. PMID: 31849182 Free article.
Phylogenetic Cluster Analysis Identifies Virological and Behavioral Drivers of Human Immunodeficiency Virus Transmission in Men Who Have Sex With Men.
Bachmann N, Kusejko K, Nguyen H, Chaudron SE, Kadelka C, Turk T, Böni J, Perreau M, Klimkait T, Yerly S, Battegay M, Rauch A, Ramette A, Vernazza P, Bernasconi E, Cavassini M, Günthard HF, Kouyos RD; Swiss HIV Cohort Study. Bachmann N, et al. Clin Infect Dis. 2021 Jun 15;72(12):2175-2183. doi: 10.1093/cid/ciaa411. Clin Infect Dis. 2021. PMID: 32300807 Free article.
Diabetes mellitus is a risk factor for prolonged SARS-CoV-2 viral shedding in lower respiratory tract samples of critically ill patients.
Buetti N, Trimboli P, Mazzuchelli T, Lo Priore E, Balmelli C, Trkola A, Conti M, Martinetti G, Elzi L, Ceschi A, Consonni V, Ogna A, Forni-Ogna V, Bernasconi E. Buetti N, et al. Among authors: martinetti g. Endocrine. 2020 Dec;70(3):454-460. doi: 10.1007/s12020-020-02465-4. Epub 2020 Sep 1. Endocrine. 2020. PMID: 32870469 Free PMC article.
The influence of human genetic variation on Epstein-Barr virus sequence diversity.
Rüeger S, Hammer C, Loetscher A, McLaren PJ, Lawless D, Naret O, Khanna N, Bernasconi E, Cavassini M, Günthard HF, Kahlert CR, Rauch A, Depledge DP, Morfopoulou S, Breuer J, Zdobnov E, Fellay J; Swiss HIV Cohort Study. Rüeger S, et al. Sci Rep. 2021 Feb 25;11(1):4586. doi: 10.1038/s41598-021-84070-7. Sci Rep. 2021. PMID: 33633271 Free PMC article.
Author Correction: The influence of human genetic variation on Epstein-Barr virus sequence diversity.
Rüeger S, Hammer C, Loetscher A, McLaren PJ, Lawless D, Naret O, Khanna N, Bernasconi E, Cavassini M, Günthard HF, Kahlert CR, Rauch A, Depledge DP, Morfopoulou S, Breuer J, Zdobnov E, Fellay J; Swiss HIV Cohort Study. Rüeger S, et al. Sci Rep. 2021 Apr 20;11(1):8946. doi: 10.1038/s41598-021-87274-z. Sci Rep. 2021. PMID: 33879823 Free PMC article. No abstract available.
Increasing Frequency and Transmission of HIV-1 Non-B Subtypes Among Men Who Have Sex With Men in the Swiss HIV Cohort Study.
Duran Ramirez JJ, Ballouz T, Nguyen H, Kusejko K, Chaudron SE, Huber M, Hirsch HH, Perreau M, Ramette A, Yerly S, Cavassini M, Stöckle M, Furrer H, Vernazza P, Bernasconi E, Günthard HF, Kouyos RD; Swiss HIV Cohort Study. Duran Ramirez JJ, et al. J Infect Dis. 2022 Jan 18;225(2):306-316. doi: 10.1093/infdis/jiab360. J Infect Dis. 2022. PMID: 34260728 Free article.
304 results