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Gapless assembly of complete human and plant chromosomes using only nanopore sequencing.
Koren S, Bao Z, Guarracino A, Ou S, Goodwin S, Jenike KM, Lucas J, McNulty B, Park J, Rautiainen M, Rhie A, Roelofs D, Schneiders H, Vrijenhoek I, Nijbroek K, Ware D, Schatz MC, Garrison E, Huang S, McCombie WR, Miga KH, Wittenberg AHJ, Phillippy AM. Koren S, et al. Among authors: bao z. bioRxiv [Preprint]. 2024 Mar 19:2024.03.15.585294. doi: 10.1101/2024.03.15.585294. bioRxiv. 2024. PMID: 38529488 Free PMC article. Preprint.
Building pangenome graphs.
Garrison E, Guarracino A, Heumos S, Villani F, Bao Z, Tattini L, Hagmann J, Vorbrugg S, Marco-Sola S, Kubica C, Ashbrook DG, Thorell K, Rusholme-Pilcher RL, Liti G, Rudbeck E, Nahnsen S, Yang Z, Moses MN, Nobrega FL, Wu Y, Chen H, de Ligt J, Sudmant PH, Soranzo N, Colonna V, Williams RW, Prins P. Garrison E, et al. Among authors: bao z. bioRxiv [Preprint]. 2023 Apr 6:2023.04.05.535718. doi: 10.1101/2023.04.05.535718. bioRxiv. 2023. PMID: 37066137 Free PMC article. Preprint.
Genome architecture and tetrasomic inheritance of autotetraploid potato.
Bao Z, Li C, Li G, Wang P, Peng Z, Cheng L, Li H, Zhang Z, Li Y, Huang W, Ye M, Dong D, Cheng Z, VanderZaag P, Jacobsen E, Bachem CWB, Dong S, Zhang C, Huang S, Zhou Q. Bao Z, et al. Mol Plant. 2022 Jul 4;15(7):1211-1226. doi: 10.1016/j.molp.2022.06.009. Epub 2022 Jun 22. Mol Plant. 2022. PMID: 35733345 Free article.
Graph pangenome captures missing heritability and empowers tomato breeding.
Zhou Y, Zhang Z, Bao Z, Li H, Lyu Y, Zan Y, Wu Y, Cheng L, Fang Y, Wu K, Zhang J, Lyu H, Lin T, Gao Q, Saha S, Mueller L, Fei Z, Städler T, Xu S, Zhang Z, Speed D, Huang S. Zhou Y, et al. Among authors: bao z. Nature. 2022 Jun;606(7914):527-534. doi: 10.1038/s41586-022-04808-9. Epub 2022 Jun 8. Nature. 2022. PMID: 35676474 Free PMC article.
Genome evolution and diversity of wild and cultivated potatoes.
Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Tang D, et al. Among authors: bao z. Nature. 2022 Jun;606(7914):535-541. doi: 10.1038/s41586-022-04822-x. Epub 2022 Jun 8. Nature. 2022. PMID: 35676481 Free PMC article.
Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding.
Wu Y, Li D, Hu Y, Li H, Ramstein GP, Zhou S, Zhang X, Bao Z, Zhang Y, Song B, Zhou Y, Zhou Y, Gagnon E, Särkinen T, Knapp S, Zhang C, Städler T, Buckler ES, Huang S. Wu Y, et al. Among authors: bao z. Cell. 2023 May 25;186(11):2313-2328.e15. doi: 10.1016/j.cell.2023.04.008. Epub 2023 May 4. Cell. 2023. PMID: 37146612 Free article.
Genome architecture and tetrasomic inheritance of autotetraploid potato.
Bao Z, Li C, Li G, Wang P, Peng Z, Cheng L, Li H, Zhang Z, Li Y, Huang W, Ye M, Dong D, Cheng Z, VanderZaag P, Jacobsen E, Bachem CWB, Dong S, Zhang C, Huang S, Zhou Q. Bao Z, et al. Mol Plant. 2023 Nov 6;16(11):1866. doi: 10.1016/j.molp.2023.10.005. Epub 2023 Oct 13. Mol Plant. 2023. PMID: 37837966 Free article. No abstract available.
Addendum: Genome evolution and diversity of wild and cultivated potatoes.
Tang D, Jia Y, Zhang J, Li H, Cheng L, Wang P, Bao Z, Liu Z, Feng S, Zhu X, Li D, Zhu G, Wang H, Zhou Y, Zhou Y, Bryan GJ, Buell CR, Zhang C, Huang S. Tang D, et al. Among authors: bao z. Nature. 2022 Sep;609(7929):E14. doi: 10.1038/s41586-022-05298-5. Nature. 2022. PMID: 36100670 Free PMC article. No abstract available.
What Was George Forrest's Plant Collection Journey like in China?
Shi K, Jin M, Wu R, Zou Y, Liao S, Xiang Z, Luo J, Zhong X, Bao Z. Shi K, et al. Among authors: bao z. Plants (Basel). 2024 May 15;13(10):1367. doi: 10.3390/plants13101367. Plants (Basel). 2024. PMID: 38794438 Free PMC article.
2,446 results