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Gapless assembly of complete human and plant chromosomes using only nanopore sequencing.
Koren S, Bao Z, Guarracino A, Ou S, Goodwin S, Jenike KM, Lucas J, McNulty B, Park J, Rautiainen M, Rhie A, Roelofs D, Schneiders H, Vrijenhoek I, Nijbroek K, Ware D, Schatz MC, Garrison E, Huang S, McCombie WR, Miga KH, Wittenberg AHJ, Phillippy AM. Koren S, et al. Among authors: nijbroek k. bioRxiv [Preprint]. 2024 Mar 19:2024.03.15.585294. doi: 10.1101/2024.03.15.585294. bioRxiv. 2024. PMID: 38529488 Free PMC article. Preprint.
Segmental duplications drive the evolution of accessory regions in a major crop pathogen.
van Westerhoven AC, Aguilera-Galvez C, Nakasato-Tagami G, Shi-Kunne X, Martinez de la Parte E, Chavarro-Carrero E, Meijer HJG, Feurtey A, Maryani N, Ordóñez N, Schneiders H, Nijbroek K, Wittenberg AHJ, Hofstede R, García-Bastidas F, Sørensen A, Swennen R, Drenth A, Stukenbrock EH, Kema GHJ, Seidl MF. van Westerhoven AC, et al. Among authors: nijbroek k. New Phytol. 2024 Apr;242(2):610-625. doi: 10.1111/nph.19604. Epub 2024 Feb 25. New Phytol. 2024. PMID: 38402521
The structure of the tetraploid sour cherry 'Schattenmorelle' (Prunus cerasus L.) genome reveals insights into its segmental allopolyploid nature.
Wöhner TW, Emeriewen OF, Wittenberg AHJ, Nijbroek K, Wang RP, Blom EJ, Schneiders H, Keilwagen J, Berner T, Hoff KJ, Gabriel L, Thierfeldt H, Almolla O, Barchi L, Schuster M, Lempe J, Peil A, Flachowsky H. Wöhner TW, et al. Among authors: nijbroek k. Front Plant Sci. 2023 Dec 1;14:1284478. doi: 10.3389/fpls.2023.1284478. eCollection 2023. Front Plant Sci. 2023. PMID: 38107002 Free PMC article.
A PARTHENOGENESIS allele from apomictic dandelion can induce egg cell division without fertilization in lettuce.
Underwood CJ, Vijverberg K, Rigola D, Okamoto S, Oplaat C, Camp RHMOD, Radoeva T, Schauer SE, Fierens J, Jansen K, Mansveld S, Busscher M, Xiong W, Datema E, Nijbroek K, Blom EJ, Bicknell R, Catanach A, Erasmuson S, Winefield C, van Tunen AJ, Prins M, Schranz ME, van Dijk PJ. Underwood CJ, et al. Among authors: nijbroek k. Nat Genet. 2022 Jan;54(1):84-93. doi: 10.1038/s41588-021-00984-y. Epub 2022 Jan 6. Nat Genet. 2022. PMID: 34992267