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Systematic immune cell dysregulation and molecular subtypes revealed by single-cell RNA-seq of subjects with type 1 diabetes.
Honardoost MA, Adinatha A, Schmidt F, Ranjan B, Ghaeidamini M, Arul Rayan N, Gek Liang Lim M, Joanito I, Xiao Xuan Lin Q, Rajagopalan D, Qi Mok S, Hwang YY, Larbi A, Khor CC, Foo R, Boehm BO, Prabhakar S. Honardoost MA, et al. Among authors: schmidt f. Genome Med. 2024 Mar 27;16(1):45. doi: 10.1186/s13073-024-01300-z. Genome Med. 2024. PMID: 38539228 Free PMC article.
Integrative multi-omics landscape of fluoxetine action across 27 brain regions reveals global increase in energy metabolism and region-specific chromatin remodelling.
Rayan NA, Kumar V, Aow J, Rastegar N, Lim MGL, O'Toole N, Aliwarga E, Arcego DM, Yeo HTG, Wong JY, Lee MY, Schmidt F, Haja HS, Tam WL, Zhang TY, Diorio J, Anacker C, Hen R, Parent C, Meaney MJ, Prabhakar S. Rayan NA, et al. Among authors: schmidt f. Mol Psychiatry. 2022 Nov;27(11):4510-4525. doi: 10.1038/s41380-022-01725-1. Epub 2022 Sep 2. Mol Psychiatry. 2022. PMID: 36056172 Free PMC article.
Prediction of single-cell gene expression for transcription factor analysis.
Behjati Ardakani F, Kattler K, Heinen T, Schmidt F, Feuerborn D, Gasparoni G, Lepikhov K, Nell P, Hengstler J, Walter J, Schulz MH. Behjati Ardakani F, et al. Among authors: schmidt f. Gigascience. 2020 Oct 30;9(11):giaa113. doi: 10.1093/gigascience/giaa113. Gigascience. 2020. PMID: 33124660 Free PMC article.
TF-Prioritizer: a Java pipeline to prioritize condition-specific transcription factors.
Hoffmann M, Trummer N, Schwartz L, Jankowski J, Lee HK, Willruth LL, Lazareva O, Yuan K, Baumgarten N, Schmidt F, Baumbach J, Schulz MH, Blumenthal DB, Hennighausen L, List M. Hoffmann M, et al. Among authors: schmidt f. Gigascience. 2022 Dec 28;12:giad026. doi: 10.1093/gigascience/giad026. Epub 2023 May 3. Gigascience. 2022. PMID: 37132521 Free PMC article.
2,139 results