Collado-Vides J - Search Results

1

The complete genome sequence of Escherichia coli K-12.

Blattner FR, Plunkett G 3rd, Bloch CA, Perna NT, Burland V, Riley M, Collado-Vides J, Glasner JD, Rode CK, Mayhew GF, Gregor J, Davis NW, Kirkpatrick HA, Goeden MA, Rose DJ, Mau B, Shao Y. Blattner FR, et al. Science. 1997 Sep 5;277(5331):1453-62. doi: 10.1126/science.277.5331.1453. Science. 1997. PMID: 9278503

2

RegulonDB (version 3.0): transcriptional regulation and operon organization in Escherichia coli K-12.

Salgado H, Santos-Zavaleta A, Gama-Castro S, Millán-Zárate D, Blattner FR, Collado-Vides J. Salgado H, et al. Nucleic Acids Res. 2000 Jan 1;28(1):65-7. doi: 10.1093/nar/28.1.65. Nucleic Acids Res. 2000. PMID: 10592182 Free PMC article.

3

Prediction of transcriptional regulatory sites in the complete genome sequence of Escherichia coli K-12.

Thieffry D, Salgado H, Huerta AM, Collado-Vides J. Thieffry D, et al. Bioinformatics. 1998 Jun;14(5):391-400. doi: 10.1093/bioinformatics/14.5.391. Bioinformatics. 1998. PMID: 9682052

4

The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12.

Pérez-Rueda E, Collado-Vides J. Pérez-Rueda E, et al. Nucleic Acids Res. 2000 Apr 15;28(8):1838-47. doi: 10.1093/nar/28.8.1838. Nucleic Acids Res. 2000. PMID: 10734204 Free PMC article.

5

RegulonDB: a database on transcriptional regulation in Escherichia coli.

Huerta AM, Salgado H, Thieffry D, Collado-Vides J. Huerta AM, et al. Nucleic Acids Res. 1998 Jan 1;26(1):55-9. doi: 10.1093/nar/26.1.55. Nucleic Acids Res. 1998. PMID: 9399800 Free PMC article.

6

Syntactic recognition of regulatory regions in Escherichia coli.

Rosenblueth DA, Thieffry D, Huerta AM, Salgado H, Collado-Vides J. Rosenblueth DA, et al. Comput Appl Biosci. 1996 Oct;12(5):415-22. doi: 10.1093/bioinformatics/12.5.415. Comput Appl Biosci. 1996. PMID: 8996790

7

RegulonDB (version 2.0): a database on transcriptional regulation in Escherichia coli.

Salgado H, Santos A, Garza-Ramos U, van Helden J, Díaz E, Collado-Vides J. Salgado H, et al. Nucleic Acids Res. 1999 Jan 1;27(1):59-60. doi: 10.1093/nar/27.1.59. Nucleic Acids Res. 1999. PMID: 9847141 Free PMC article.

8

Operons in Escherichia coli: genomic analyses and predictions.

Salgado H, Moreno-Hagelsieb G, Smith TF, Collado-Vides J. Salgado H, et al. Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6652-7. doi: 10.1073/pnas.110147297. Proc Natl Acad Sci U S A. 2000. PMID: 10823905 Free PMC article.

9

Control site location and transcriptional regulation in Escherichia coli.

Collado-Vides J, Magasanik B, Gralla JD. Collado-Vides J, et al. Microbiol Rev. 1991 Sep;55(3):371-94. doi: 10.1128/mr.55.3.371-394.1991. Microbiol Rev. 1991. PMID: 1943993 Free PMC article. Review.

10

From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli.

Thieffry D, Huerta AM, Pérez-Rueda E, Collado-Vides J. Thieffry D, et al. Bioessays. 1998 May;20(5):433-40. doi: 10.1002/(SICI)1521-1878(199805)20:5<433::AID-BIES10>3.0.CO;2-2. Bioessays. 1998. PMID: 9670816

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