R35 GM141891/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2021	2
2022	9
2023	6
2024	0

1

Anti-invasive efficacy and survival benefit of the YAP-TEAD inhibitor verteporfin in preclinical glioblastoma models.

Barrette AM, Ronk H, Joshi T, Mussa Z, Mehrotra M, Bouras A, Nudelman G, Jesu Raj JG, Bozec D, Lam W, Houldsworth J, Yong R, Zaslavsky E, Hadjipanayis CG, Birtwistle MR, Tsankova NM. Barrette AM, et al. Neuro Oncol. 2022 May 4;24(5):694-707. doi: 10.1093/neuonc/noab244. Neuro Oncol. 2022. PMID: 34657158 Free PMC article.

2

Leveraging modeling and simulation to optimize the therapeutic window for epigenetic modifier drugs.

Walz AC, Van De Vyver AJ, Yu L, Birtwistle MR, Krogan NJ, Bouhaddou M. Walz AC, et al. Pharmacol Ther. 2022 Jul;235:108162. doi: 10.1016/j.pharmthera.2022.108162. Epub 2022 Feb 18. Pharmacol Ther. 2022. PMID: 35189161 Free PMC article. Review.

3

Network inference from perturbation time course data.

Sarmah D, Smith GR, Bouhaddou M, Stern AD, Erskine J, Birtwistle MR. Sarmah D, et al. NPJ Syst Biol Appl. 2022 Nov 1;8(1):42. doi: 10.1038/s41540-022-00253-6. NPJ Syst Biol Appl. 2022. PMID: 36316338 Free PMC article.

4

Theory for High-Throughput Genetic Interaction Screening.

McCarthy ME, Dodd WB, Lu X, Pritko DJ, Patel ND, Haskell CV, Sanabria H, Blenner MA, Birtwistle MR. McCarthy ME, et al. ACS Synth Biol. 2023 Aug 18;12(8):2290-2300. doi: 10.1021/acssynbio.2c00627. Epub 2023 Jul 18. ACS Synth Biol. 2023. PMID: 37463472 Free article.

5

Mesowestern Blot: Simultaneous Analysis of Hundreds of Submicroliter Lysates.

Zadeh CO, Huggins JR, Sarmah D, Westbury BC, Interiano WR, Jordan MC, Phillips SA, Dodd WB, Meredith WO, Harold NJ, Erdem C, Birtwistle MR. Zadeh CO, et al. ACS Omega. 2022 Aug 11;7(33):28912-28923. doi: 10.1021/acsomega.2c02201. eCollection 2022 Aug 23. ACS Omega. 2022. PMID: 36033686 Free PMC article.

6

Protocol for Creating Antibodies with Complex Fluorescence Spectra.

McCarthy ME, Anglin CM, Peer HA, Boleman SA, Klaubert SR, Birtwistle MR. McCarthy ME, et al. Bioconjug Chem. 2021 Jun 16;32(6):1156-1166. doi: 10.1021/acs.bioconjchem.1c00220. Epub 2021 May 19. Bioconjug Chem. 2021. PMID: 34009954 Free PMC article.

7

Relating individual cell division events to single-cell ERK and Akt activity time courses.

Stern AD, Smith GR, Santos LC, Sarmah D, Zhang X, Lu X, Iuricich F, Pandey G, Iyengar R, Birtwistle MR. Stern AD, et al. Sci Rep. 2022 Oct 27;12(1):18077. doi: 10.1038/s41598-022-23071-6. Sci Rep. 2022. PMID: 36302844 Free PMC article.

8

Computational speed-up of large-scale, single-cell model simulations via a fully integrated SBML-based format.

Mutsuddy A, Erdem C, Huggins JR, Salim M, Cook D, Hobbs N, Feltus FA, Birtwistle MR. Mutsuddy A, et al. Bioinform Adv. 2023 Mar 23;3(1):vbad039. doi: 10.1093/bioadv/vbad039. eCollection 2023. Bioinform Adv. 2023. PMID: 37020976 Free PMC article.

9

MOBILE pipeline enables identification of context-specific networks and regulatory mechanisms.

Erdem C, Gross SM, Heiser LM, Birtwistle MR. Erdem C, et al. Nat Commun. 2023 Jul 6;14(1):3991. doi: 10.1038/s41467-023-39729-2. Nat Commun. 2023. PMID: 37414767 Free PMC article.

10

SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems.

Dräger A, Helikar T, Barberis M, Birtwistle M, Calzone L, Chaouiya C, Hasenauer J, Karr JR, Niarakis A, Rodríguez Martínez M, Saez-Rodriguez J, Thakar J. Dräger A, et al. Bioinformatics. 2021 Nov 5;37(21):3702-3706. doi: 10.1093/bioinformatics/btab229. Bioinformatics. 2021. PMID: 34179955 Free PMC article.

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