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Year Number of Results
2021 1
2022 8
2023 12
2024 2

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22 results

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Page 1
Temporal modelling using single-cell transcriptomics.
Ding J, Sharon N, Bar-Joseph Z. Ding J, et al. Nat Rev Genet. 2022 Jun;23(6):355-368. doi: 10.1038/s41576-021-00444-7. Epub 2022 Jan 31. Nat Rev Genet. 2022. PMID: 35102309 Free PMC article. Review.
Spatial mapping of cellular senescence: emerging challenges and opportunities.
Gurkar AU, Gerencser AA, Mora AL, Nelson AC, Zhang AR, Lagnado AB, Enninful A, Benz C, Furman D, Beaulieu D, Jurk D, Thompson EL, Wu F, Rodriguez F, Barthel G, Chen H, Phatnani H, Heckenbach I, Chuang JH, Horrell J, Petrescu J, Alder JK, Lee JH, Niedernhofer LJ, Kumar M, Königshoff M, Bueno M, Sokka M, Scheibye-Knudsen M, Neretti N, Eickelberg O, Adams PD, Hu Q, Zhu Q, Porritt RA, Dong R, Peters S, Victorelli S, Pengo T, Khaliullin T, Suryadevara V, Fu X, Bar-Joseph Z, Ji Z, Passos JF. Gurkar AU, et al. Nat Aging. 2023 Jul;3(7):776-790. doi: 10.1038/s43587-023-00446-6. Epub 2023 Jul 3. Nat Aging. 2023. PMID: 37400722 Free PMC article. Review.
Clustering spatial transcriptomics data.
Teng H, Yuan Y, Bar-Joseph Z. Teng H, et al. Bioinformatics. 2022 Jan 27;38(4):997-1004. doi: 10.1093/bioinformatics/btab704. Bioinformatics. 2022. PMID: 34623423 Free PMC article.
Interactive single-cell data analysis using Cellar.
Hasanaj E, Wang J, Sarathi A, Ding J, Bar-Joseph Z. Hasanaj E, et al. Nat Commun. 2022 Apr 14;13(1):1998. doi: 10.1038/s41467-022-29744-0. Nat Commun. 2022. PMID: 35422041 Free PMC article.
Modelling Human Post-Implantation Development via Extra-Embryonic Niche Engineering.
Hislop J, Alavi A, Song Q, Schoenberger R, Kamyar KF, LeGraw R, Velazquez J, Mokhtari T, Taheri MN, Rytel M, de Sousa Lopes SMC, Watkins S, Stolz D, Kiani S, Sozen B, Bar-Joseph Z, Ebrahimkhani MR. Hislop J, et al. bioRxiv [Preprint]. 2023 Jul 24:2023.06.15.545118. doi: 10.1101/2023.06.15.545118. bioRxiv. 2023. PMID: 37398391 Free PMC article. Updated. Preprint.
Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging.
Quardokus EM, Saunders DC, McDonough E, Hickey JW, Werlein C, Surrette C, Rajbhandari P, Casals AM, Tian H, Lowery L, Neumann EK, Björklund F, Neelakantan TV, Croteau J, Wiblin AE, Fisher J, Livengood AJ, Dowell KG, Silverstein JC, Spraggins JM, Pryhuber GS, Deutsch G, Ginty F, Nolan GP, Melov S, Jonigk D, Caldwell MA, Vlachos IS, Muller W, Gehlenborg N, Stockwell BR, Lundberg E, Snyder MP, Germain RN, Camarillo JM, Kelleher NL, Börner K, Radtke AJ. Quardokus EM, et al. Nat Methods. 2023 Aug;20(8):1174-1178. doi: 10.1038/s41592-023-01846-7. Epub 2023 Jul 19. Nat Methods. 2023. PMID: 37468619 Free PMC article.
Multiset multicover methods for discriminative marker selection.
Hasanaj E, Alavi A, Gupta A, Póczos B, Bar-Joseph Z. Hasanaj E, et al. Cell Rep Methods. 2022 Nov 11;2(11):100332. doi: 10.1016/j.crmeth.2022.100332. eCollection 2022 Nov 21. Cell Rep Methods. 2022. PMID: 36452867 Free PMC article.
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).
Jain S, Pei L, Spraggins JM, Angelo M, Carson JP, Gehlenborg N, Ginty F, Gonçalves JP, Hagood JS, Hickey JW, Kelleher NL, Laurent LC, Lin S, Lin Y, Liu H, Naba A, Nakayasu ES, Qian WJ, Radtke A, Robson P, Stockwell BR, Van de Plas R, Vlachos IS, Zhou M; HuBMAP Consortium; Börner K, Snyder MP. Jain S, et al. Nat Cell Biol. 2023 Aug;25(8):1089-1100. doi: 10.1038/s41556-023-01194-w. Epub 2023 Jul 19. Nat Cell Biol. 2023. PMID: 37468756 Free PMC article. Review.
22 results