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Digital expression profiling of the compartmentalized translatome of Purkinje neurons.
Kratz A, Beguin P, Kaneko M, Chimura T, Suzuki AM, Matsunaga A, Kato S, Bertin N, Lassmann T, Vigot R, Carninci P, Plessy C, Launey T. Kratz A, et al. Among authors: carninci p. Genome Res. 2014 Aug;24(8):1396-410. doi: 10.1101/gr.164095.113. Epub 2014 Jun 5. Genome Res. 2014. PMID: 24904046 Free PMC article.
Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.
Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T, Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA, Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts P, Muramatsu M, Okazaki Y, Kawai J, Hayashizaki Y. Carninci P, et al. Genome Res. 2003 Jun;13(6B):1273-89. doi: 10.1101/gr.1119703. Genome Res. 2003. PMID: 12819125 Free PMC article.
Genome-wide analysis of mammalian promoter architecture and evolution.
Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, Ponjavic J, Semple CA, Taylor MS, Engström PG, Frith MC, Forrest AR, Alkema WB, Tan SL, Plessy C, Kodzius R, Ravasi T, Kasukawa T, Fukuda S, Kanamori-Katayama M, Kitazume Y, Kawaji H, Kai C, Nakamura M, Konno H, Nakano K, Mottagui-Tabar S, Arner P, Chesi A, Gustincich S, Persichetti F, Suzuki H, Grimmond SM, Wells CA, Orlando V, Wahlestedt C, Liu ET, Harbers M, Kawai J, Bajic VB, Hume DA, Hayashizaki Y. Carninci P, et al. Nat Genet. 2006 Jun;38(6):626-35. doi: 10.1038/ng1789. Epub 2006 Apr 28. Nat Genet. 2006. PMID: 16645617
Evolutionary turnover of mammalian transcription start sites.
Frith MC, Ponjavic J, Fredman D, Kai C, Kawai J, Carninci P, Hayashizaki Y, Sandelin A. Frith MC, et al. Among authors: carninci p. Genome Res. 2006 Jun;16(6):713-22. doi: 10.1101/gr.5031006. Epub 2006 May 10. Genome Res. 2006. PMID: 16687732 Free PMC article.
The complexity of the mammalian transcriptome.
Gustincich S, Sandelin A, Plessy C, Katayama S, Simone R, Lazarevic D, Hayashizaki Y, Carninci P. Gustincich S, et al. Among authors: carninci p. J Physiol. 2006 Sep 1;575(Pt 2):321-32. doi: 10.1113/jphysiol.2006.115568. Epub 2006 Jul 20. J Physiol. 2006. PMID: 16857706 Free PMC article. Review.
A code for transcription initiation in mammalian genomes.
Frith MC, Valen E, Krogh A, Hayashizaki Y, Carninci P, Sandelin A. Frith MC, et al. Among authors: carninci p. Genome Res. 2008 Jan;18(1):1-12. doi: 10.1101/gr.6831208. Epub 2007 Nov 21. Genome Res. 2008. PMID: 18032727 Free PMC article.
A resource for transcriptomic analysis in the mouse brain.
Plessy C, Fagiolini M, Wagatsuma A, Harasawa N, Kuji T, Asaka-Oba A, Kanzaki Y, Fujishima S, Waki K, Nakahara H, Hensch TK, Carninci P. Plessy C, et al. Among authors: carninci p. PLoS One. 2008 Aug 20;3(8):e3012. doi: 10.1371/journal.pone.0003012. PLoS One. 2008. PMID: 18714383 Free PMC article.
395 results