Cavalcoli JD - Search Results

1

Genome-Wide Identification of Klebsiella pneumoniae Fitness Genes during Lung Infection.

Bachman MA, Breen P, Deornellas V, Mu Q, Zhao L, Wu W, Cavalcoli JD, Mobley HL. Bachman MA, et al. Among authors: cavalcoli jd. mBio. 2015 Jun 9;6(3):e00775. doi: 10.1128/mBio.00775-15. mBio. 2015. PMID: 26060277 Free PMC article.

2

Complete Genome Sequence of Klebsiella pneumoniae Strain ATCC 43816 KPPR1, a Rifampin-Resistant Mutant Commonly Used in Animal, Genetic, and Molecular Biology Studies.

Broberg CA, Wu W, Cavalcoli JD, Miller VL, Bachman MA. Broberg CA, et al. Among authors: cavalcoli jd. Genome Announc. 2014 Sep 25;2(5):e00924-14. doi: 10.1128/genomeA.00924-14. Genome Announc. 2014. PMID: 25291761 Free PMC article.

3

CD1d-unrestricted NKT cells are endowed with a hybrid function far superior than that of iNKT cells.

Farr AR, Wu W, Choi B, Cavalcoli JD, Laouar Y. Farr AR, et al. Among authors: cavalcoli jd. Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12841-6. doi: 10.1073/pnas.1323405111. Epub 2014 Aug 20. Proc Natl Acad Sci U S A. 2014. PMID: 25143585 Free PMC article.

4

Next-generation sequencing identifies the Danforth's short tail mouse mutation as a retrotransposon insertion affecting Ptf1a expression.

Vlangos CN, Siuniak AN, Robinson D, Chinnaiyan AM, Lyons RH Jr, Cavalcoli JD, Keegan CE. Vlangos CN, et al. Among authors: cavalcoli jd. PLoS Genet. 2013;9(2):e1003205. doi: 10.1371/journal.pgen.1003205. Epub 2013 Feb 21. PLoS Genet. 2013. PMID: 23437000 Free PMC article.

5

Novel bioinformatics method for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

Bai Y, Hassler J, Ziyar A, Li P, Wright Z, Menon R, Omenn GS, Cavalcoli JD, Kaufman RJ, Sartor MA. Bai Y, et al. Among authors: cavalcoli jd. PLoS One. 2014 Jul 3;9(7):e100864. doi: 10.1371/journal.pone.0100864. eCollection 2014. PLoS One. 2014. PMID: 24991935 Free PMC article.

6

Identification of cross-species shared transcriptional networks of diabetic nephropathy in human and mouse glomeruli.

Hodgin JB, Nair V, Zhang H, Randolph A, Harris RC, Nelson RG, Weil EJ, Cavalcoli JD, Patel JM, Brosius FC 3rd, Kretzler M. Hodgin JB, et al. Among authors: cavalcoli jd. Diabetes. 2013 Jan;62(1):299-308. doi: 10.2337/db11-1667. Epub 2012 Nov 8. Diabetes. 2013. PMID: 23139354 Free PMC article.

7

ConceptGen: a gene set enrichment and gene set relation mapping tool.

Sartor MA, Mahavisno V, Keshamouni VG, Cavalcoli J, Wright Z, Karnovsky A, Kuick R, Jagadish HV, Mirel B, Weymouth T, Athey B, Omenn GS. Sartor MA, et al. Bioinformatics. 2010 Feb 15;26(4):456-63. doi: 10.1093/bioinformatics/btp683. Epub 2009 Dec 9. Bioinformatics. 2010. PMID: 20007254 Free PMC article.

8

Decade-long bacterial community dynamics in cystic fibrosis airways.

Zhao J, Schloss PD, Kalikin LM, Carmody LA, Foster BK, Petrosino JF, Cavalcoli JD, VanDevanter DR, Murray S, Li JZ, Young VB, LiPuma JJ. Zhao J, et al. Among authors: cavalcoli jd. Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5809-14. doi: 10.1073/pnas.1120577109. Epub 2012 Mar 26. Proc Natl Acad Sci U S A. 2012. PMID: 22451929 Free PMC article.

9

A genetic network model of cellular responses to lithium treatment and cocaine abuse in bipolar disorder.

McEachin RC, Chen H, Sartor MA, Saccone SF, Keller BJ, Prossin AR, Cavalcoli JD, McInnis MG. McEachin RC, et al. Among authors: cavalcoli jd. BMC Syst Biol. 2010 Nov 19;4:158. doi: 10.1186/1752-0509-4-158. BMC Syst Biol. 2010. PMID: 21092101 Free PMC article.

10

A bioinformatics approach reveals novel interactions of the OVOL transcription factors in the regulation of epithelial - mesenchymal cell reprogramming and cancer progression.

Roca H, Pande M, Huo JS, Hernandez J, Cavalcoli JD, Pienta KJ, McEachin RC. Roca H, et al. Among authors: cavalcoli jd. BMC Syst Biol. 2014 Mar 10;8:29. doi: 10.1186/1752-0509-8-29. BMC Syst Biol. 2014. PMID: 24612742 Free PMC article.

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