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A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement.
Chaffin AS, Huang YF, Smith S, Bekele WA, Babiker E, Gnanesh BN, Foresman BJ, Blanchard SG, Jay JJ, Reid RW, Wight CP, Chao S, Oliver R, Islamovic E, Kolb FL, McCartney C, Mitchell Fetch JW, Beattie AD, Bjørnstad Å, Bonman JM, Langdon T, Howarth CJ, Brouwer CR, Jellen EN, Klos KE, Poland JA, Hsieh TF, Brown R, Jackson E, Schlueter JA, Tinker NA. Chaffin AS, et al. Among authors: chao s. Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.10.0102. Plant Genome. 2016. PMID: 27898818 Free article.
Population Genomics Related to Adaptation in Elite Oat Germplasm.
Esvelt Klos K, Huang YF, Bekele WA, Obert DE, Babiker E, Beattie AD, Bjørnstad Å, Bonman JM, Carson ML, Chao S, Gnanesh BN, Griffiths I, Harrison SA, Howarth CJ, Hu G, Ibrahim A, Islamovic E, Jackson EW, Jannink JL, Kolb FL, McMullen MS, Mitchell Fetch J, Murphy JP, Ohm HW, Rines HW, Rossnagel BG, Schlueter JA, Sorrells ME, Wight CP, Yan W, Tinker NA. Esvelt Klos K, et al. Among authors: chao s. Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2015.10.0103. Plant Genome. 2016. PMID: 27898836 Free article.
Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.
Oliver RE, Lazo GR, Lutz JD, Rubenfield MJ, Tinker NA, Anderson JM, Wisniewski Morehead NH, Adhikary D, Jellen EN, Maughan PJ, Brown Guedira GL, Chao S, Beattie AD, Carson ML, Rines HW, Obert DE, Bonman JM, Jackson EW. Oliver RE, et al. Among authors: chao s. BMC Genomics. 2011 Jan 27;12:77. doi: 10.1186/1471-2164-12-77. BMC Genomics. 2011. PMID: 21272354 Free PMC article.
SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species.
Oliver RE, Tinker NA, Lazo GR, Chao S, Jellen EN, Carson ML, Rines HW, Obert DE, Lutz JD, Shackelford I, Korol AB, Wight CP, Gardner KM, Hattori J, Beattie AD, Bjørnstad Å, Bonman JM, Jannink JL, Sorrells ME, Brown-Guedira GL, Mitchell Fetch JW, Harrison SA, Howarth CJ, Ibrahim A, Kolb FL, McMullen MS, Murphy JP, Ohm HW, Rossnagel BG, Yan W, Miclaus KJ, Hiller J, Maughan PJ, Redman Hulse RR, Anderson JM, Islamovic E, Jackson EW. Oliver RE, et al. Among authors: chao s. PLoS One. 2013;8(3):e58068. doi: 10.1371/journal.pone.0058068. Epub 2013 Mar 22. PLoS One. 2013. PMID: 23533580 Free PMC article.
Haplotype-based genotyping-by-sequencing in oat genome research.
Bekele WA, Wight CP, Chao S, Howarth CJ, Tinker NA. Bekele WA, et al. Among authors: chao s. Plant Biotechnol J. 2018 Aug;16(8):1452-1463. doi: 10.1111/pbi.12888. Epub 2018 Mar 25. Plant Biotechnol J. 2018. PMID: 29345800 Free PMC article.
Molecular Mapping of Stem Rust Resistance Loci Effective Against the Ug99 Race Group of the Stem Rust Pathogen and Validation of a Single Nucleotide Polymorphism Marker Linked to Stem Rust Resistance Gene Sr28.
Babiker EM, Gordon TC, Chao S, Rouse MN, Wanyera R, Acevedo M, Brown-Guedira G, Bonman JM. Babiker EM, et al. Among authors: chao s. Phytopathology. 2017 Feb;107(2):208-215. doi: 10.1094/PHYTO-08-16-0294-R. Epub 2016 Nov 30. Phytopathology. 2017. PMID: 27775500 Free article.
1,723 results