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A draft de novo genome assembly for the northern bobwhite (Colinus virginianus) reveals evidence for a rapid decline in effective population size beginning in the Late Pleistocene.
Halley YA, Dowd SE, Decker JE, Seabury PM, Bhattarai E, Johnson CD, Rollins D, Tizard IR, Brightsmith DJ, Peterson MJ, Taylor JF, Seabury CM. Halley YA, et al. PLoS One. 2014 Mar 12;9(3):e90240. doi: 10.1371/journal.pone.0090240. eCollection 2014. PLoS One. 2014. PMID: 24621616 Free PMC article.
Annotated Draft Genome Assemblies for the Northern Bobwhite (Colinus virginianus) and the Scaled Quail (Callipepla squamata) Reveal Disparate Estimates of Modern Genome Diversity and Historic Effective Population Size.
Oldeschulte DL, Halley YA, Wilson ML, Bhattarai EK, Brashear W, Hill J, Metz RP, Johnson CD, Rollins D, Peterson MJ, Bickhart DM, Decker JE, Sewell JF, Seabury CM. Oldeschulte DL, et al. Among authors: halley ya. G3 (Bethesda). 2017 Sep 7;7(9):3047-3058. doi: 10.1534/g3.117.043083. G3 (Bethesda). 2017. PMID: 28717047 Free PMC article.
Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle.
Seabury CM, Oldeschulte DL, Saatchi M, Beever JE, Decker JE, Halley YA, Bhattarai EK, Molaei M, Freetly HC, Hansen SL, Yampara-Iquise H, Johnson KA, Kerley MS, Kim J, Loy DD, Marques E, Neibergs HL, Schnabel RD, Shike DW, Spangler ML, Weaber RL, Garrick DJ, Taylor JF. Seabury CM, et al. Among authors: halley ya. BMC Genomics. 2017 May 18;18(1):386. doi: 10.1186/s12864-017-3754-y. BMC Genomics. 2017. PMID: 28521758 Free PMC article.