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642 results

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An atlas of active enhancers across human cell types and tissues.
Andersson R, Gebhard C, Miguel-Escalada I, Hoof I, Bornholdt J, Boyd M, Chen Y, Zhao X, Schmidl C, Suzuki T, Ntini E, Arner E, Valen E, Li K, Schwarzfischer L, Glatz D, Raithel J, Lilje B, Rapin N, Bagger FO, Jørgensen M, Andersen PR, Bertin N, Rackham O, Burroughs AM, Baillie JK, Ishizu Y, Shimizu Y, Furuhata E, Maeda S, Negishi Y, Mungall CJ, Meehan TF, Lassmann T, Itoh M, Kawaji H, Kondo N, Kawai J, Lennartsson A, Daub CO, Heutink P, Hume DA, Jensen TH, Suzuki H, Hayashizaki Y, Müller F, Forrest ARR, Carninci P, Rehli M, Sandelin A. Andersson R, et al. Among authors: hayashizaki y. Nature. 2014 Mar 27;507(7493):455-461. doi: 10.1038/nature12787. Nature. 2014. PMID: 24670763 Free PMC article.
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium; Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH. Grapotte M, et al. Among authors: hayashizaki y. Nat Commun. 2021 Jun 2;12(1):3297. doi: 10.1038/s41467-021-23143-7. Nat Commun. 2021. PMID: 34078885 Free PMC article.
Mapping of 19032 mouse cDNAs on mouse chromosomes.
Yamanaka I, Kiyosawa H, Kondo S, Saito T, Carninci P, Shinagawa A, Aizawa K, Fukuda S, Hara A, Itoh M, Kawai J, Shibata K, Arakawa T, Ishii Y, Hayashizaki Y. Yamanaka I, et al. Among authors: hayashizaki y. J Struct Funct Genomics. 2002;2(1):23-8. doi: 10.1023/a:1013203019444. J Struct Funct Genomics. 2002. PMID: 12836671
CAGE: cap analysis of gene expression.
Kodzius R, Kojima M, Nishiyori H, Nakamura M, Fukuda S, Tagami M, Sasaki D, Imamura K, Kai C, Harbers M, Hayashizaki Y, Carninci P. Kodzius R, et al. Among authors: hayashizaki y. Nat Methods. 2006 Mar;3(3):211-22. doi: 10.1038/nmeth0306-211. Nat Methods. 2006. PMID: 16489339 No abstract available.
Noncoding RNA transcription beyond annotated genes.
Carninci P, Hayashizaki Y. Carninci P, et al. Among authors: hayashizaki y. Curr Opin Genet Dev. 2007 Apr;17(2):139-44. doi: 10.1016/j.gde.2007.02.008. Epub 2007 Feb 20. Curr Opin Genet Dev. 2007. PMID: 17317145 Review.
Large-scale clustering of CAGE tag expression data.
Shimokawa K, Okamura-Oho Y, Kurita T, Frith MC, Kawai J, Carninci P, Hayashizaki Y. Shimokawa K, et al. Among authors: hayashizaki y. BMC Bioinformatics. 2007 May 21;8:161. doi: 10.1186/1471-2105-8-161. BMC Bioinformatics. 2007. PMID: 17517134 Free PMC article.
Transcriptomics resources for functional genomics.
Kawai J, Carninci P, Hayashizaki Y. Kawai J, et al. Among authors: hayashizaki y. Brief Funct Genomic Proteomic. 2007 Sep;6(3):171-9. doi: 10.1093/bfgp/elm024. Epub 2007 Nov 19. Brief Funct Genomic Proteomic. 2007. PMID: 18029381
Hidden layers of human small RNAs.
Kawaji H, Nakamura M, Takahashi Y, Sandelin A, Katayama S, Fukuda S, Daub CO, Kai C, Kawai J, Yasuda J, Carninci P, Hayashizaki Y. Kawaji H, et al. Among authors: hayashizaki y. BMC Genomics. 2008 Apr 10;9:157. doi: 10.1186/1471-2164-9-157. BMC Genomics. 2008. PMID: 18402656 Free PMC article.
642 results