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Machine-driven parameter screen of biochemical reactions.
Poulain S, Arnaud O, Kato S, Chen I, Ishida H, Carninci P, Plessy C. Poulain S, et al. Among authors: kato s. Nucleic Acids Res. 2020 Apr 17;48(7):e37. doi: 10.1093/nar/gkaa079. Nucleic Acids Res. 2020. PMID: 32025730 Free PMC article.
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Grapotte M, Saraswat M, Bessière C, Menichelli C, Ramilowski JA, Severin J, Hayashizaki Y, Itoh M, Tagami M, Murata M, Kojima-Ishiyama M, Noma S, Noguchi S, Kasukawa T, Hasegawa A, Suzuki H, Nishiyori-Sueki H, Frith MC; FANTOM consortium; Chatelain C, Carninci P, de Hoon MJL, Wasserman WW, Bréhélin L, Lecellier CH. Grapotte M, et al. Nat Commun. 2021 Jun 2;12(1):3297. doi: 10.1038/s41467-021-23143-7. Nat Commun. 2021. PMID: 34078885 Free PMC article.
SCPortalen: human and mouse single-cell centric database.
Abugessaisa I, Noguchi S, Böttcher M, Hasegawa A, Kouno T, Kato S, Tada Y, Ura H, Abe K, Shin JW, Plessy C, Carninci P, Kasukawa T. Abugessaisa I, et al. Among authors: kato s. Nucleic Acids Res. 2018 Jan 4;46(D1):D781-D787. doi: 10.1093/nar/gkx949. Nucleic Acids Res. 2018. PMID: 29045713 Free PMC article.
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution.
Kouno T, Moody J, Kwon AT, Shibayama Y, Kato S, Huang Y, Böttcher M, Motakis E, Mendez M, Severin J, Luginbühl J, Abugessaisa I, Hasegawa A, Takizawa S, Arakawa T, Furuno M, Ramalingam N, West J, Suzuki H, Kasukawa T, Lassmann T, Hon CC, Arner E, Carninci P, Plessy C, Shin JW. Kouno T, et al. Among authors: kato s. Nat Commun. 2019 Jan 21;10(1):360. doi: 10.1038/s41467-018-08126-5. Nat Commun. 2019. PMID: 30664627 Free PMC article.
6,961 results