Martin D - Search Results

1

Detection of a SARS-CoV-2 variant of concern in South Africa.

Tegally H, Wilkinson E, Giovanetti M, Iranzadeh A, Fonseca V, Giandhari J, Doolabh D, Pillay S, San EJ, Msomi N, Mlisana K, von Gottberg A, Walaza S, Allam M, Ismail A, Mohale T, Glass AJ, Engelbrecht S, Van Zyl G, Preiser W, Petruccione F, Sigal A, Hardie D, Marais G, Hsiao NY, Korsman S, Davies MA, Tyers L, Mudau I, York D, Maslo C, Goedhals D, Abrahams S, Laguda-Akingba O, Alisoltani-Dehkordi A, Godzik A, Wibmer CK, Sewell BT, Lourenço J, Alcantara LCJ, Kosakovsky Pond SL, Weaver S, Martin D, Lessells RJ, Bhiman JN, Williamson C, de Oliveira T. Tegally H, et al. Among authors: martin d. Nature. 2021 Apr;592(7854):438-443. doi: 10.1038/s41586-021-03402-9. Epub 2021 Mar 9. Nature. 2021. PMID: 33690265

2

RDP2: recombination detection and analysis from sequence alignments.

Martin DP, Williamson C, Posada D. Martin DP, et al. Bioinformatics. 2005 Jan 15;21(2):260-2. doi: 10.1093/bioinformatics/bth490. Epub 2004 Sep 17. Bioinformatics. 2005. PMID: 15377507

3

A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints.

Martin DP, Posada D, Crandall KA, Williamson C. Martin DP, et al. AIDS Res Hum Retroviruses. 2005 Jan;21(1):98-102. doi: 10.1089/aid.2005.21.98. AIDS Res Hum Retroviruses. 2005. PMID: 15665649

4

HIV type 1 subtype C gag and nef diversity in Southern Africa.

Bredell H, Martin DP, Van Harmelen J, Varsani A, Sheppard HW, Donovan R, Gray CM; HIVNET028 Study Team; Williamson C. Bredell H, et al. AIDS Res Hum Retroviruses. 2007 Mar;23(3):477-81. doi: 10.1089/aid.2006.0232. AIDS Res Hum Retroviruses. 2007. PMID: 17411382

5

Genetic characteristics of HIV-1 subtype C envelopes inducing cross-neutralizing antibodies.

Rademeyer C, Moore PL, Taylor N, Martin DP, Choge IA, Gray ES, Sheppard HW, Gray C, Morris L, Williamson C; HIVNET 028 study team. Rademeyer C, et al. Virology. 2007 Nov 10;368(1):172-81. doi: 10.1016/j.virol.2007.06.013. Epub 2007 Jul 16. Virology. 2007. PMID: 17632196 Free article.

6

Transmission of HIV-1 CTL escape variants provides HLA-mismatched recipients with a survival advantage.

Chopera DR, Woodman Z, Mlisana K, Mlotshwa M, Martin DP, Seoighe C, Treurnicht F, de Rosa DA, Hide W, Karim SA, Gray CM, Williamson C; CAPRISA 002 Study Team. Chopera DR, et al. PLoS Pathog. 2008 Mar 21;4(3):e1000033. doi: 10.1371/journal.ppat.1000033. PLoS Pathog. 2008. PMID: 18369479 Free PMC article.

7

Conserved positive selection signals in gp41 across multiple subtypes and difference in selection signals detectable in gp41 sequences sampled during acute and chronic HIV-1 subtype C infection.

Bandawe GP, Martin DP, Treurnicht F, Mlisana K, Karim SS, Williamson C; CAPRISA 002 Acute Infection Study Team. Bandawe GP, et al. Virol J. 2008 Nov 24;5:141. doi: 10.1186/1743-422X-5-141. Virol J. 2008. PMID: 19025632 Free PMC article.

8

Adaptive changes in HIV-1 subtype C proteins during early infection are driven by changes in HLA-associated immune pressure.

Treurnicht FK, Seoighe C, Martin DP, Wood N, Abrahams MR, Rosa Dde A, Bredell H, Woodman Z, Hide W, Mlisana K, Karim SA, Gray CM, Williamson C. Treurnicht FK, et al. Among authors: martin dp. Virology. 2010 Jan 20;396(2):213-25. doi: 10.1016/j.virol.2009.10.002. Epub 2009 Nov 13. Virology. 2010. PMID: 19913270 Free PMC article.

9

Virological and immunological factors associated with HIV-1 differential disease progression in HLA-B 58:01-positive individuals.

Chopera DR, Mlotshwa M, Woodman Z, Mlisana K, de Assis Rosa D, Martin DP, Abdool Karim S, Gray CM, Williamson C; CAPRISA 002 Study Team. Chopera DR, et al. Among authors: martin dp. J Virol. 2011 Jul;85(14):7070-80. doi: 10.1128/JVI.02543-10. Epub 2011 May 25. J Virol. 2011. PMID: 21613398 Free PMC article.

10

Intersubtype differences in the effect of a rare p24 gag mutation on HIV-1 replicative fitness.

Chopera DR, Cotton LA, Zawaira A, Mann JK, Ngandu NK, Ntale R, Carlson JM, Mlisana K, Woodman Z, de Assis Rosa D, Martin E, Miura T, Pereyra F, Walker BD, Gray CM, Martin DP, Ndung'u T, Brockman MA, Karim SA, Brumme ZL, Williamson C; CAPRISA 002 Study Team. Chopera DR, et al. Among authors: martin dp, martin e. J Virol. 2012 Dec;86(24):13423-33. doi: 10.1128/JVI.02171-12. Epub 2012 Sep 26. J Virol. 2012. PMID: 23015721 Free PMC article.

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