Martin R - Search Results

1

gammaBOriS: Identification and Taxonomic Classification of Origins of Replication in Gammaproteobacteria using Motif-based Machine Learning.

Sperlea T, Muth L, Martin R, Weigel C, Waldminghaus T, Heider D. Sperlea T, et al. Among authors: martin r. Sci Rep. 2020 Apr 21;10(1):6727. doi: 10.1038/s41598-020-63424-7. Sci Rep. 2020. PMID: 32317695 Free PMC article.

2

ContraDRG: Automatic Partial Charge Prediction by Machine Learning.

Martin R, Heider D. Martin R, et al. Front Genet. 2019 Oct 30;10:990. doi: 10.3389/fgene.2019.00990. eCollection 2019. Front Genet. 2019. PMID: 31737032 Free PMC article.

3

Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis.

Hackl T, Martin R, Barenhoff K, Duponchel S, Heider D, Fischer MG. Hackl T, et al. Among authors: martin r. Sci Data. 2020 Jan 21;7(1):29. doi: 10.1038/s41597-020-0363-4. Sci Data. 2020. PMID: 31964893 Free PMC article.

4

CORDITE: The Curated CORona Drug InTERactions Database for SARS-CoV-2.

Martin R, Löchel HF, Welzel M, Hattab G, Hauschild AC, Heider D. Martin R, et al. iScience. 2020 Jul 24;23(7):101297. doi: 10.1016/j.isci.2020.101297. Epub 2020 Jun 20. iScience. 2020. PMID: 32619700 Free PMC article.

5

MOSGA: Modular Open-Source Genome Annotator.

Martin R, Hackl T, Hattab G, Fischer MG, Heider D. Martin R, et al. Bioinformatics. 2021 Apr 1;36(22-23):5514-5515. doi: 10.1093/bioinformatics/btaa1003. Bioinformatics. 2021. PMID: 33258916

6

MOSGA 2: Comparative genomics and validation tools.

Martin R, Dreßler H, Hattab G, Hackl T, Fischer MG, Heider D. Martin R, et al. Comput Struct Biotechnol J. 2021 Sep 28;19:5504-5509. doi: 10.1016/j.csbj.2021.09.024. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34712396 Free PMC article.

7

Guideline for software life cycle in health informatics.

Hauschild AC, Martin R, Holst SC, Wienbeck J, Heider D. Hauschild AC, et al. Among authors: martin r. iScience. 2022 Nov 9;25(12):105534. doi: 10.1016/j.isci.2022.105534. eCollection 2022 Dec 22. iScience. 2022. PMID: 36437879 Free PMC article. Review.

8

ODNA: identification of organellar DNA by machine learning.

Martin R, Nguyen MK, Lowack N, Heider D. Martin R, et al. Bioinformatics. 2023 May 4;39(5):btad326. doi: 10.1093/bioinformatics/btad326. Bioinformatics. 2023. PMID: 37195463 Free PMC article.

9

LAMPPrimerBank, a manually curated database of experimentally validated loop-mediated isothermal amplification primers for detection of respiratory pathogens.

Arabi-Jeshvaghani F, Javadi-Zarnaghi F, Löchel HF, Martin R, Heider D. Arabi-Jeshvaghani F, et al. Among authors: martin r. Infection. 2023 Dec;51(6):1809-1818. doi: 10.1007/s15010-023-02100-0. Epub 2023 Oct 12. Infection. 2023. PMID: 37828369

10

Ensemble-GNN: federated ensemble learning with graph neural networks for disease module discovery and classification.

Pfeifer B, Chereda H, Martin R, Saranti A, Clemens S, Hauschild AC, Beißbarth T, Holzinger A, Heider D. Pfeifer B, et al. Among authors: martin r. Bioinformatics. 2023 Nov 1;39(11):btad703. doi: 10.1093/bioinformatics/btad703. Bioinformatics. 2023. PMID: 37988152 Free PMC article.

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