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Stability of XGCGCp, GCGCYp, and XGCGCYp helixes: an empirical estimate of the energetics of hydrogen bonds in nucleic acids.
Freier SM, Sugimoto N, Sinclair A, Alkema D, Neilson T, Kierzek R, Caruthers MH, Turner DH. Freier SM, et al. Among authors: neilson t. Biochemistry. 1986 Jun 3;25(11):3214-9. doi: 10.1021/bi00359a020. Biochemistry. 1986. PMID: 3730357
The free energy increments for dangling ends on GCGC are similar to the corresponding increments reported for the GGCC core [Freier, S. M., Alkema, D., Sinclair, A., Neilson, T., & Turner, D. H. (1985) Biochemistry 24, 4533-4539], indicating a nearest-neighbor m …
The free energy increments for dangling ends on GCGC are similar to the corresponding increments reported for the GGCC core [Freier, S. M., …
Contributions of dangling end stacking and terminal base-pair formation to the stabilities of XGGCCp, XCCGGp, XGGCCYp, and XCCGGYp helixes.
Freier SM, Alkema D, Sinclair A, Neilson T, Turner DH. Freier SM, et al. Among authors: neilson t. Biochemistry. 1985 Aug 13;24(17):4533-9. doi: 10.1021/bi00338a008. Biochemistry. 1985. PMID: 4063336
In contrast, a 3'-dangling nucleotide increases the Tm at 1 X 10(-4) M strands 7-23 degrees C, depending on the sequence [Freier, S. M., Burger, B. J., Alkema, D., Neilson, T., & Turner, D. H. (1983) Biochemistry 22, 6198-6206]. These results are consistent with …
In contrast, a 3'-dangling nucleotide increases the Tm at 1 X 10(-4) M strands 7-23 degrees C, depending on the sequence [Freier, S. M., Bur …
Improved free energies for G.C base-pairs.
Freier SM, Sinclair A, Neilson T, Turner DH. Freier SM, et al. Among authors: neilson t. J Mol Biol. 1985 Oct 5;185(3):645-7. doi: 10.1016/0022-2836(85)90077-4. J Mol Biol. 1985. PMID: 4057259
Improved free-energy parameters for predictions of RNA duplex stability.
Freier SM, Kierzek R, Jaeger JA, Sugimoto N, Caruthers MH, Neilson T, Turner DH. Freier SM, et al. Among authors: neilson t. Proc Natl Acad Sci U S A. 1986 Dec;83(24):9373-7. doi: 10.1073/pnas.83.24.9373. Proc Natl Acad Sci U S A. 1986. PMID: 2432595 Free PMC article.
39 results