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Page 1
A Library of Phosphoproteomic and Chromatin Signatures for Characterizing Cellular Responses to Drug Perturbations.
Litichevskiy L, Peckner R, Abelin JG, Asiedu JK, Creech AL, Davis JF, Davison D, Dunning CM, Egertson JD, Egri S, Gould J, Ko T, Johnson SA, Lahr DL, Lam D, Liu Z, Lyons NJ, Lu X, MacLean BX, Mungenast AE, Officer A, Natoli TE, Papanastasiou M, Patel J, Sharma V, Toder C, Tubelli AA, Young JZ, Carr SA, Golub TR, Subramanian A, MacCoss MJ, Tsai LH, Jaffe JD. Litichevskiy L, et al. Among authors: peckner r. Cell Syst. 2018 Apr 25;6(4):424-443.e7. doi: 10.1016/j.cels.2018.03.012. Epub 2018 Apr 11. Cell Syst. 2018. PMID: 29655704 Free PMC article.
Avant-garde: an automated data-driven DIA data curation tool.
Vaca Jacome AS, Peckner R, Shulman N, Krug K, DeRuff KC, Officer A, Christianson KE, MacLean B, MacCoss MJ, Carr SA, Jaffe JD. Vaca Jacome AS, et al. Among authors: peckner r. Nat Methods. 2020 Dec;17(12):1237-1244. doi: 10.1038/s41592-020-00986-4. Epub 2020 Nov 16. Nat Methods. 2020. PMID: 33199889 Free PMC article.
Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds.
Dele-Oni DO, Christianson KE, Egri SB, Vaca Jacome AS, DeRuff KC, Mullahoo J, Sharma V, Davison D, Ko T, Bula M, Blanchard J, Young JZ, Litichevskiy L, Lu X, Lam D, Asiedu JK, Toder C, Officer A, Peckner R, MacCoss MJ, Tsai LH, Carr SA, Papanastasiou M, Jaffe JD. Dele-Oni DO, et al. Among authors: peckner r. Sci Data. 2021 Aug 25;8(1):226. doi: 10.1038/s41597-021-01008-4. Sci Data. 2021. PMID: 34433823 Free PMC article.
Chasing Tails: Cathepsin-L Improves Structural Analysis of Histones by HX-MS.
Papanastasiou M, Mullahoo J, DeRuff KC, Bajrami B, Karageorgos I, Johnston SE, Peckner R, Myers SA, Carr SA, Jaffe JD. Papanastasiou M, et al. Among authors: peckner r. Mol Cell Proteomics. 2019 Oct;18(10):2089-2098. doi: 10.1074/mcp.RA119.001325. Epub 2019 Aug 13. Mol Cell Proteomics. 2019. PMID: 31409669 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 33451480
Streamlined Protocol for Deep Proteomic Profiling of FAC-sorted Cells and Its Application to Freshly Isolated Murine Immune Cells.
Myers SA, Rhoads A, Cocco AR, Peckner R, Haber AL, Schweitzer LD, Krug K, Mani DR, Clauser KR, Rozenblatt-Rosen O, Hacohen N, Regev A, Carr SA. Myers SA, et al. Among authors: peckner r. Mol Cell Proteomics. 2019 May;18(5):995-1009. doi: 10.1074/mcp.RA118.001259. Epub 2019 Feb 21. Mol Cell Proteomics. 2019. PMID: 30792265 Free PMC article.
[No title available]
[No authors listed] [No authors listed] PMID: 33451796
Causal interactions from proteomic profiles: Molecular data meet pathway knowledge.
Babur Ö, Luna A, Korkut A, Durupinar F, Siper MC, Dogrusoz U, Vaca Jacome AS, Peckner R, Christianson KE, Jaffe JD, Spellman PT, Aslan JE, Sander C, Demir E. Babur Ö, et al. Among authors: peckner r. Patterns (N Y). 2021 May 12;2(6):100257. doi: 10.1016/j.patter.2021.100257. eCollection 2021 Jun 11. Patterns (N Y). 2021. PMID: 34179843 Free PMC article.