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Neutralising antibodies in Spike mediated SARS-CoV-2 adaptation.
Kemp SA, Collier DA, Datir R, Ferreira I, Gayed S, Jahun A, Hosmillo M, Rees-Spear C, Mlcochova P, Lumb IU, Roberts DJ, Chandra A, Temperton N; CITIID-NIHR BioResource COVID-19 Collaboration; COVID-19 Genomics UK (COG-UK) Consortium; Sharrocks K, Blane E, Briggs J, van GM, Smith K, Bradley JR, Smith C, Doffinger R, Ceron-Gutierrez L, Barcenas-Morales G, Pollock DD, Goldstein RA, Smielewska A, Skittrall JP, Gouliouris T, Goodfellow IG, Gkrania-Klotsas E, Illingworth C, McCoy LE, Gupta RK. Kemp SA, et al. Among authors: pollock dd. medRxiv [Preprint]. 2020 Dec 29:2020.12.05.20241927. doi: 10.1101/2020.12.05.20241927. medRxiv. 2020. PMID: 33398302 Free PMC article. Updated. Preprint.
SARS-CoV-2 evolution during treatment of chronic infection.
Kemp SA, Collier DA, Datir RP, Ferreira IATM, Gayed S, Jahun A, Hosmillo M, Rees-Spear C, Mlcochova P, Lumb IU, Roberts DJ, Chandra A, Temperton N; CITIID-NIHR BioResource COVID-19 Collaboration; COVID-19 Genomics UK (COG-UK) Consortium; Sharrocks K, Blane E, Modis Y, Leigh KE, Briggs JAG, van Gils MJ, Smith KGC, Bradley JR, Smith C, Doffinger R, Ceron-Gutierrez L, Barcenas-Morales G, Pollock DD, Goldstein RA, Smielewska A, Skittrall JP, Gouliouris T, Goodfellow IG, Gkrania-Klotsas E, Illingworth CJR, McCoy LE, Gupta RK. Kemp SA, et al. Among authors: pollock dd. Nature. 2021 Apr;592(7853):277-282. doi: 10.1038/s41586-021-03291-y. Epub 2021 Feb 5. Nature. 2021. PMID: 33545711 Free PMC article.
Author Correction: SARS-CoV-2 evolution during treatment of chronic infection.
Kemp SA, Collier DA, Datir RP, Ferreira IATM, Gayed S, Jahun A, Hosmillo M, Rees-Spear C, Mlcochova P, Lumb IU, Roberts DJ, Chandra A, Temperton N; CITIID-NIHR BioResource COVID-19 Collaboration; COVID-19 Genomics UK (COG-UK) Consortium; Sharrocks K, Blane E, Modis Y, Leigh KE, Briggs JAG, van Gils MJ, Smith KGC, Bradley JR, Smith C, Doffinger R, Ceron-Gutierrez L, Barcenas-Morales G, Pollock DD, Goldstein RA, Smielewska A, Skittrall JP, Gouliouris T, Goodfellow IG, Gkrania-Klotsas E, Illingworth CJR, McCoy LE, Gupta RK. Kemp SA, et al. Among authors: pollock dd. Nature. 2022 Aug;608(7922):E23. doi: 10.1038/s41586-022-05104-2. Nature. 2022. PMID: 35864233 Free PMC article. No abstract available.
Strong evidence for protein epistasis, weak evidence against it.
Pollock DD, Goldstein RA. Pollock DD, et al. Proc Natl Acad Sci U S A. 2014 Apr 15;111(15):E1450. doi: 10.1073/pnas.1401112111. Epub 2014 Mar 20. Proc Natl Acad Sci U S A. 2014. PMID: 24706894 Free PMC article. No abstract available.
The tangled bank of amino acids.
Goldstein RA, Pollock DD. Goldstein RA, et al. Among authors: pollock dd. Protein Sci. 2016 Jul;25(7):1354-62. doi: 10.1002/pro.2930. Epub 2016 May 12. Protein Sci. 2016. PMID: 27028523 Free PMC article.
Amino acid coevolution induces an evolutionary Stokes shift.
Pollock DD, Thiltgen G, Goldstein RA. Pollock DD, et al. Proc Natl Acad Sci U S A. 2012 May 22;109(21):E1352-9. doi: 10.1073/pnas.1120084109. Epub 2012 Apr 30. Proc Natl Acad Sci U S A. 2012. PMID: 22547823 Free PMC article.
Nonadaptive Amino Acid Convergence Rates Decrease over Time.
Goldstein RA, Pollard ST, Shah SD, Pollock DD. Goldstein RA, et al. Among authors: pollock dd. Mol Biol Evol. 2015 Jun;32(6):1373-81. doi: 10.1093/molbev/msv041. Epub 2015 Mar 3. Mol Biol Evol. 2015. PMID: 25737491 Free PMC article.
112 results