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A SARS-CoV-2 protein interaction map reveals targets for drug repurposing.
Gordon DE, Jang GM, Bouhaddou M, Xu J, Obernier K, White KM, O'Meara MJ, Rezelj VV, Guo JZ, Swaney DL, Tummino TA, Hüttenhain R, Kaake RM, Richards AL, Tutuncuoglu B, Foussard H, Batra J, Haas K, Modak M, Kim M, Haas P, Polacco BJ, Braberg H, Fabius JM, Eckhardt M, Soucheray M, Bennett MJ, Cakir M, McGregor MJ, Li Q, Meyer B, Roesch F, Vallet T, Mac Kain A, Miorin L, Moreno E, Naing ZZC, Zhou Y, Peng S, Shi Y, Zhang Z, Shen W, Kirby IT, Melnyk JE, Chorba JS, Lou K, Dai SA, Barrio-Hernandez I, Memon D, Hernandez-Armenta C, Lyu J, Mathy CJP, Perica T, Pilla KB, Ganesan SJ, Saltzberg DJ, Rakesh R, Liu X, Rosenthal SB, Calviello L, Venkataramanan S, Liboy-Lugo J, Lin Y, Huang XP, Liu Y, Wankowicz SA, Bohn M, Safari M, Ugur FS, Koh C, Savar NS, Tran QD, Shengjuler D, Fletcher SJ, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, Sharp PP, Wenzell NA, Kuzuoglu-Ozturk D, Wang HY, Trenker R, Young JM, Cavero DA, Hiatt J, Roth TL, Rathore U, Subramanian A, Noack J, Hubert M, Stroud RM, Frankel AD, Rosenberg OS, Verba KA, Agard DA, Ott M, Emerman M, Jura N, von Zastrow M, Verdin E, Ashworth A, Schwartz O, d'Enfert C, Mukherjee S, Jacobson M, Malik HS, Fujimori DG, Ideker T, Craik CS,… See abstract for full author list ➔ Gordon DE, et al. Among authors: sali a. Nature. 2020 Jul;583(7816):459-468. doi: 10.1038/s41586-020-2286-9. Epub 2020 Apr 30. Nature. 2020. PMID: 32353859 Free PMC article.
How does a protein fold?
Sali A, Shakhnovich E, Karplus M. Sali A, et al. Nature. 1994 May 19;369(6477):248-51. doi: 10.1038/369248a0. Nature. 1994. PMID: 7710478
Protein complex compositions predicted by structural similarity.
Davis FP, Braberg H, Shen MY, Pieper U, Sali A, Madhusudhan MS. Davis FP, et al. Among authors: sali a. Nucleic Acids Res. 2006 May 31;34(10):2943-52. doi: 10.1093/nar/gkl353. Print 2006. Nucleic Acids Res. 2006. PMID: 16738133 Free PMC article.
A survey of integral alpha-helical membrane proteins.
Kelly L, Pieper U, Eswar N, Hays FA, Li M, Roe-Zurz Z, Kroetz DL, Giacomini KM, Stroud RM, Sali A. Kelly L, et al. Among authors: sali a. J Struct Funct Genomics. 2009 Dec;10(4):269-80. doi: 10.1007/s10969-009-9069-8. Epub 2009 Sep 17. J Struct Funct Genomics. 2009. PMID: 19760129 Free PMC article.
Comparison of human solute carriers.
Schlessinger A, Matsson P, Shima JE, Pieper U, Yee SW, Kelly L, Apeltsin L, Stroud RM, Ferrin TE, Giacomini KM, Sali A. Schlessinger A, et al. Among authors: sali a. Protein Sci. 2010 Mar;19(3):412-28. doi: 10.1002/pro.320. Protein Sci. 2010. PMID: 20052679 Free PMC article.
Prediction of protease substrates using sequence and structure features.
Barkan DT, Hostetter DR, Mahrus S, Pieper U, Wells JA, Craik CS, Sali A. Barkan DT, et al. Among authors: sali a. Bioinformatics. 2010 Jul 15;26(14):1714-22. doi: 10.1093/bioinformatics/btq267. Epub 2010 May 26. Bioinformatics. 2010. PMID: 20505003 Free PMC article.
633 results