Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

196 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
Genomic Evidence of In-Flight Transmission of SARS-CoV-2 Despite Predeparture Testing.
Swadi T, Geoghegan JL, Devine T, McElnay C, Sherwood J, Shoemack P, Ren X, Storey M, Jefferies S, Smit E, Hadfield J, Kenny A, Jelley L, Sporle A, McNeill A, Reynolds GE, Mouldey K, Lowe L, Sonder G, Drummond AJ, Huang S, Welch D, Holmes EC, French N, Simpson CR, de Ligt J. Swadi T, et al. Among authors: simpson cr. Emerg Infect Dis. 2021 Mar;27(3):687-693. doi: 10.3201/eid2703.204714. Epub 2021 Jan 5. Emerg Infect Dis. 2021. PMID: 33400642 Free PMC article. Review.
Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand.
Geoghegan JL, Ren X, Storey M, Hadfield J, Jelley L, Jefferies S, Sherwood J, Paine S, Huang S, Douglas J, Mendes FK, Sporle A, Baker MG, Murdoch DR, French N, Simpson CR, Welch D, Drummond AJ, Holmes EC, Duchêne S, de Ligt J. Geoghegan JL, et al. Among authors: simpson cr. Nat Commun. 2020 Dec 11;11(1):6351. doi: 10.1038/s41467-020-20235-8. Nat Commun. 2020. PMID: 33311501 Free PMC article.
Use of Genomics to Track Coronavirus Disease Outbreaks, New Zealand.
Geoghegan JL, Douglas J, Ren X, Storey M, Hadfield J, Silander OK, Freed NE, Jelley L, Jefferies S, Sherwood J, Paine S, Huang S, Sporle A, Baker MG, Murdoch DR, Drummond AJ, Welch D, Simpson CR, French N, Holmes EC, de Ligt J. Geoghegan JL, et al. Among authors: simpson cr. Emerg Infect Dis. 2021 May;27(5):1317-1322. doi: 10.3201/eid2705.204579. Emerg Infect Dis. 2021. PMID: 33900175 Free PMC article.
COVID-19 vaccine strategies for Aotearoa New Zealand: a mathematical modelling study.
Nguyen T, Adnan M, Nguyen BP, de Ligt J, Geoghegan JL, Dean R, Jefferies S, Baker MG, Seah WK, Sporle AA, French NP, Murdoch DR, Welch D, Simpson CR. Nguyen T, et al. Among authors: simpson cr. Lancet Reg Health West Pac. 2021 Oct;15:100256. doi: 10.1016/j.lanwpc.2021.100256. Epub 2021 Aug 19. Lancet Reg Health West Pac. 2021. PMID: 34426804 Free PMC article.
Phylodynamics reveals the role of human travel and contact tracing in controlling the first wave of COVID-19 in four island nations.
Douglas J, Mendes FK, Bouckaert R, Xie D, Jiménez-Silva CL, Swanepoel C, de Ligt J, Ren X, Storey M, Hadfield J, Simpson CR, Geoghegan JL, Drummond AJ, Welch D. Douglas J, et al. Among authors: simpson cr. Virus Evol. 2021 Jun 8;7(2):veab052. doi: 10.1093/ve/veab052. eCollection 2021. Virus Evol. 2021. PMID: 34527282 Free PMC article.
Informing the public health response to COVID-19: a systematic review of risk factors for disease, severity, and mortality.
Flook M, Jackson C, Vasileiou E, Simpson CR, Muckian MD, Agrawal U, McCowan C, Jia Y, Murray JLK, Ritchie LD, Robertson C, Stock SJ, Wang X, Woolhouse MEJ, Sheikh A, Stagg HR. Flook M, et al. Among authors: simpson cr. BMC Infect Dis. 2021 Apr 12;21(1):342. doi: 10.1186/s12879-021-05992-1. BMC Infect Dis. 2021. PMID: 33845766 Free PMC article.
Vaccine effectiveness of two-dose BNT162b2 against symptomatic and severe COVID-19 among adolescents in Brazil and Scotland over time: a test-negative case-control study.
Florentino PTV, Millington T, Cerqueira-Silva T, Robertson C, de Araújo Oliveira V, Júnior JBS, Alves FJO, Penna GO, Vital Katikireddi S, Boaventura VS, Werneck GL, Pearce N, McCowan C, Sullivan C, Agrawal U, Grange Z, Ritchie LD, Simpson CR, Sheikh A, Barreto ML, Rudan I, Barral-Netto M, Paixão ES. Florentino PTV, et al. Among authors: simpson cr. Lancet Infect Dis. 2022 Nov;22(11):1577-1586. doi: 10.1016/S1473-3099(22)00451-0. Epub 2022 Aug 8. Lancet Infect Dis. 2022. PMID: 35952702 Free PMC article.
196 results