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Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California.
Deng X, Gu W, Federman S, du Plessis L, Pybus OG, Faria NR, Wang C, Yu G, Bushnell B, Pan CY, Guevara H, Sotomayor-Gonzalez A, Zorn K, Gopez A, Servellita V, Hsu E, Miller S, Bedford T, Greninger AL, Roychoudhury P, Starita LM, Famulare M, Chu HY, Shendure J, Jerome KR, Anderson C, Gangavarapu K, Zeller M, Spencer E, Andersen KG, MacCannell D, Paden CR, Li Y, Zhang J, Tong S, Armstrong G, Morrow S, Willis M, Matyas BT, Mase S, Kasirye O, Park M, Masinde G, Chan C, Yu AT, Chai SJ, Villarino E, Bonin B, Wadford DA, Chiu CY. Deng X, et al. Among authors: villarino e. Science. 2020 Jul 31;369(6503):582-587. doi: 10.1126/science.abb9263. Epub 2020 Jun 8. Science. 2020. PMID: 32513865 Free PMC article.
Introduction, Transmission Dynamics, and Fate of Early Severe Acute Respiratory Syndrome Coronavirus 2 Lineages in Santa Clara County, California.
Villarino E, Deng X, Kemper CA, Jorden MA, Bonin B, Rudman SL, Han GS, Yu G, Wang C, Federman S, Bushnell B; CZB COVIDTracker Consortium; Wadford DA, Lin W, Tao Y, Paden CR, Bhatnagar J, MacCannell T, Tong S, Batson J, Chiu CY. Villarino E, et al. J Infect Dis. 2021 Jul 15;224(2):207-217. doi: 10.1093/infdis/jiab199. J Infect Dis. 2021. PMID: 33893501 Free PMC article.
A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage.
Deng X, Gu W, Federman S, du Plessis L, Pybus OG, Faria N, Wang C, Yu G, Pan CY, Guevara H, Sotomayor-Gonzalez A, Zorn K, Gopez A, Servellita V, Hsu E, Miller S, Bedford T, Greninger AL, Roychoudhury P, Starita LM, Famulare M, Chu HY, Shendure J, Jerome KR, Anderson C, Gangavarapu K, Zeller M, Spencer E, Andersen KG, MacCannell D, Paden CR, Li Y, Zhang J, Tong S, Armstrong G, Morrow S, Willis M, Matyas BT, Mase S, Kasirye O, Park M, Chan C, Yu AT, Chai SJ, Villarino E, Bonin B, Wadford DA, Chiu CY. Deng X, et al. Among authors: villarino e. medRxiv [Preprint]. 2020 Mar 30:2020.03.27.20044925. doi: 10.1101/2020.03.27.20044925. medRxiv. 2020. PMID: 32511579 Free PMC article. Updated. Preprint.
Evidence for Limited Early Spread of COVID-19 Within the United States, January-February 2020.
CDC COVID-19 Response Team; Jorden MA, Rudman SL, Villarino E, Hoferka S, Patel MT, Bemis K, Simmons CR, Jespersen M, Iberg Johnson J, Mytty E, Arends KD, Henderson JJ, Mathes RW, Weng CX, Duchin J, Lenahan J, Close N, Bedford T, Boeckh M, Chu HY, Englund JA, Famulare M, Nickerson DA, Rieder MJ, Shendure J, Starita LM. CDC COVID-19 Response Team, et al. Among authors: villarino e. MMWR Morb Mortal Wkly Rep. 2020 Jun 5;69(22):680-684. doi: 10.15585/mmwr.mm6922e1. MMWR Morb Mortal Wkly Rep. 2020. PMID: 32497028 Free PMC article.
Severe acute respiratory coronavirus virus 2 (SARS-CoV-2) outbreak investigation in a hospital emergency department-California, December 2020-January 2021.
Li R, Beshearse E, Malden D, Truong H, Kraushaar V, Bonin BJ, Kim J, Kennedy I, McNary J, Han GS, Rudman SL, Perz JF, Perkins KM, Glowicz J, Epson E, Benowitz I, Villarino E. Li R, et al. Among authors: villarino e. Infect Control Hosp Epidemiol. 2023 Jul;44(7):1187-1192. doi: 10.1017/ice.2022.39. Epub 2022 May 20. Infect Control Hosp Epidemiol. 2023. PMID: 35591783 Free PMC article.
Epidemiologic Findings from Case Investigations and Contact Tracing for First 200 Cases of Coronavirus Disease, Santa Clara County, California, USA.
Ortiz N, Villarino E, Lee JT, Bajema KL, Ricaldi JN, Smith S, Lin W, Cortese M, Barskey AE, Da Silva JF, Bonin BJ, Rudman S, Han GS, Fischer M, Chai SJ, Cody SH; Santa Clara County COVID-19 Case Investigation Team. Ortiz N, et al. Among authors: villarino e. Emerg Infect Dis. 2021 May;27(5):1301-1308. doi: 10.3201/eid2705.204876. Emerg Infect Dis. 2021. PMID: 33900168 Free PMC article. Review.
Sociodemographic Characteristics, Comorbidities, and Mortality Among Persons Diagnosed With Tuberculosis and COVID-19 in Close Succession in California, 2020.
Nabity SA, Han E, Lowenthal P, Henry H, Okoye N, Chakrabarty M, Chitnis AS, Kadakia A, Villarino E, Low J, Higashi J, Barry PM, Jain S, Flood J. Nabity SA, et al. Among authors: villarino e. JAMA Netw Open. 2021 Dec 1;4(12):e2136853. doi: 10.1001/jamanetworkopen.2021.36853. JAMA Netw Open. 2021. PMID: 34860244 Free PMC article.
Cross-basin and cross-taxa patterns of marine community tropicalization and deborealization in warming European seas.
Chust G, Villarino E, McLean M, Mieszkowska N, Benedetti-Cecchi L, Bulleri F, Ravaglioli C, Borja A, Muxika I, Fernandes-Salvador JA, Ibaibarriaga L, Uriarte A, Revilla M, Villate F, Iriarte A, Uriarte I, Zervoudaki S, Carstensen J, Somerfield PJ, Queirós AM, McEvoy AJ, Auber A, Hidalgo M, Coll M, Garrabou J, Gómez-Gras D, Linares C, Ramírez F, Margarit N, Lepage M, Dambrine C, Lobry J, Peck MA, de la Barra P, van Leeuwen A, Rilov G, Yeruham E, Brind'Amour A, Lindegren M. Chust G, et al. Among authors: villarino e. Nat Commun. 2024 Mar 8;15(1):2126. doi: 10.1038/s41467-024-46526-y. Nat Commun. 2024. PMID: 38459105 Free PMC article.
19 results