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Toward a protein profile of Escherichia coli: comparison to its transcription profile.
Corbin RW, Paliy O, Yang F, Shabanowitz J, Platt M, Lyons CE Jr, Root K, McAuliffe J, Jordan MI, Kustu S, Soupene E, Hunt DF. Corbin RW, et al. Among authors: yang f. Proc Natl Acad Sci U S A. 2003 Aug 5;100(16):9232-7. doi: 10.1073/pnas.1533294100. Epub 2003 Jul 23. Proc Natl Acad Sci U S A. 2003. PMID: 12878731 Free PMC article.
Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targets.
Alfaro JF, Gong CX, Monroe ME, Aldrich JT, Clauss TR, Purvine SO, Wang Z, Camp DG 2nd, Shabanowitz J, Stanley P, Hart GW, Hunt DF, Yang F, Smith RD. Alfaro JF, et al. Among authors: yang f. Proc Natl Acad Sci U S A. 2012 May 8;109(19):7280-5. doi: 10.1073/pnas.1200425109. Epub 2012 Apr 19. Proc Natl Acad Sci U S A. 2012. PMID: 22517741 Free PMC article.
Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts.
Tabb DL, Wang X, Carr SA, Clauser KR, Mertins P, Chambers MC, Holman JD, Wang J, Zhang B, Zimmerman LJ, Chen X, Gunawardena HP, Davies SR, Ellis MJ, Li S, Townsend RR, Boja ES, Ketchum KA, Kinsinger CR, Mesri M, Rodriguez H, Liu T, Kim S, McDermott JE, Payne SH, Petyuk VA, Rodland KD, Smith RD, Yang F, Chan DW, Zhang B, Zhang H, Zhang Z, Zhou JY, Liebler DC. Tabb DL, et al. Among authors: yang f. J Proteome Res. 2016 Mar 4;15(3):691-706. doi: 10.1021/acs.jproteome.5b00859. Epub 2015 Dec 22. J Proteome Res. 2016. PMID: 26653538 Free PMC article.
Applying a targeted label-free approach using LC-MS AMT tags to evaluate changes in protein phosphorylation following phosphatase inhibition.
Yang F, Jaitly N, Jayachandran H, Luo Q, Monroe ME, Du X, Gritsenko MA, Zhang R, Anderson DJ, Purvine SO, Adkins JN, Moore RJ, Mottaz HM, Ding SJ, Lipton MS, Camp DG 2nd, Udseth HR, Smith RD, Rossie S. Yang F, et al. J Proteome Res. 2007 Nov;6(11):4489-97. doi: 10.1021/pr070068e. Epub 2007 Oct 12. J Proteome Res. 2007. PMID: 17929957 Free PMC article.
Methods for pseudopodia purification and proteomic analysis.
Wang Y, Ding SJ, Wang W, Yang F, Jacobs JM, Camp D 2nd, Smith RD, Klemke RL. Wang Y, et al. Among authors: yang f. Sci STKE. 2007 Aug 21;2007(400):pl4. doi: 10.1126/stke.4002007pl4. Sci STKE. 2007. PMID: 17712138
Quantitative phosphoproteome analysis of lysophosphatidic acid induced chemotaxis applying dual-step (18)O labeling coupled with immobilized metal-ion affinity chromatography.
Ding SJ, Wang Y, Jacobs JM, Qian WJ, Yang F, Tolmachev AV, Du X, Wang W, Moore RJ, Monroe ME, Purvine SO, Waters K, Heibeck TH, Adkins JN, Camp DG 2nd, Klemke RL, Smith RD. Ding SJ, et al. Among authors: yang f. J Proteome Res. 2008 Oct;7(10):4215-24. doi: 10.1021/pr7007785. Epub 2008 Sep 12. J Proteome Res. 2008. PMID: 18785766 Free PMC article.
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