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Page 1
Evolution and epidemic spread of SARS-CoV-2 in Brazil.
Candido DS, Claro IM, de Jesus JG, Souza WM, Moreira FRR, Dellicour S, Mellan TA, du Plessis L, Pereira RHM, Sales FCS, Manuli ER, Thézé J, Almeida L, Menezes MT, Voloch CM, Fumagalli MJ, Coletti TM, da Silva CAM, Ramundo MS, Amorim MR, Hoeltgebaum HH, Mishra S, Gill MS, Carvalho LM, Buss LF, Prete CA Jr, Ashworth J, Nakaya HI, Peixoto PS, Brady OJ, Nicholls SM, Tanuri A, Rossi ÁD, Braga CKV, Gerber AL, de C Guimarães AP, Gaburo N Jr, Alencar CS, Ferreira ACS, Lima CX, Levi JE, Granato C, Ferreira GM, Francisco RS Jr, Granja F, Garcia MT, Moretti ML, Perroud MW Jr, Castiñeiras TMPP, Lazari CS, Hill SC, de Souza Santos AA, Simeoni CL, Forato J, Sposito AC, Schreiber AZ, Santos MNN, de Sá CZ, Souza RP, Resende-Moreira LC, Teixeira MM, Hubner J, Leme PAF, Moreira RG, Nogueira ML; Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network; Ferguson NM, Costa SF, Proenca-Modena JL, Vasconcelos ATR, Bhatt S, Lemey P, Wu CH, Rambaut A, Loman NJ, Aguiar RS, Pybus OG, Sabino EC, Faria NR. Candido DS, et al. Among authors: de c guimaraes ap, de souza santos aa, de jesus jg, de sa cz. Science. 2020 Sep 4;369(6508):1255-1260. doi: 10.1126/science.abd2161. Epub 2020 Jul 23. Science. 2020. PMID: 32703910 Free PMC article.
Establishment and cryptic transmission of Zika virus in Brazil and the Americas.
Faria NR, Quick J, Claro IM, Thézé J, de Jesus JG, Giovanetti M, Kraemer MUG, Hill SC, Black A, da Costa AC, Franco LC, Silva SP, Wu CH, Raghwani J, Cauchemez S, du Plessis L, Verotti MP, de Oliveira WK, Carmo EH, Coelho GE, Santelli ACFS, Vinhal LC, Henriques CM, Simpson JT, Loose M, Andersen KG, Grubaugh ND, Somasekar S, Chiu CY, Muñoz-Medina JE, Gonzalez-Bonilla CR, Arias CF, Lewis-Ximenez LL, Baylis SA, Chieppe AO, Aguiar SF, Fernandes CA, Lemos PS, Nascimento BLS, Monteiro HAO, Siqueira IC, de Queiroz MG, de Souza TR, Bezerra JF, Lemos MR, Pereira GF, Loudal D, Moura LC, Dhalia R, França RF, Magalhães T, Marques ET Jr, Jaenisch T, Wallau GL, de Lima MC, Nascimento V, de Cerqueira EM, de Lima MM, Mascarenhas DL, Neto JPM, Levin AS, Tozetto-Mendoza TR, Fonseca SN, Mendes-Correa MC, Milagres FP, Segurado A, Holmes EC, Rambaut A, Bedford T, Nunes MRT, Sabino EC, Alcantara LCJ, Loman NJ, Pybus OG. Faria NR, et al. Among authors: de lima mm, de jesus jg, de lima mc, de oliveira wk, de queiroz mg, de cerqueira em, de souza tr. Nature. 2017 Jun 15;546(7658):406-410. doi: 10.1038/nature22401. Epub 2017 May 24. Nature. 2017. PMID: 28538727 Free PMC article.
Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples.
Quick J, Grubaugh ND, Pullan ST, Claro IM, Smith AD, Gangavarapu K, Oliveira G, Robles-Sikisaka R, Rogers TF, Beutler NA, Burton DR, Lewis-Ximenez LL, de Jesus JG, Giovanetti M, Hill SC, Black A, Bedford T, Carroll MW, Nunes M, Alcantara LC Jr, Sabino EC, Baylis SA, Faria NR, Loose M, Simpson JT, Pybus OG, Andersen KG, Loman NJ. Quick J, et al. Among authors: de jesus jg. Nat Protoc. 2017 Jun;12(6):1261-1276. doi: 10.1038/nprot.2017.066. Epub 2017 May 24. Nat Protoc. 2017. PMID: 28538739 Free PMC article.
Genomic, epidemiological and digital surveillance of Chikungunya virus in the Brazilian Amazon.
Naveca FG, Claro I, Giovanetti M, de Jesus JG, Xavier J, Iani FCM, do Nascimento VA, de Souza VC, Silveira PP, Lourenço J, Santillana M, Kraemer MUG, Quick J, Hill SC, Thézé J, Carvalho RDO, Azevedo V, Salles FCDS, Nunes MRT, Lemos PDS, Candido DDS, Pereira GC, Oliveira MAA, Meneses CAR, Maito RM, Cunha CRSB, Campos DPS, Castilho MDC, Siqueira TCDS, Terra TM, de Albuquerque CFC, da Cruz LN, Abreu AL, Martins DV, Simoes DSMV, Aguiar RS, Luz SLB, Loman N, Pybus OG, Sabino EC, Okumoto O, Alcantara LCJ, Faria NR. Naveca FG, et al. Among authors: de jesus jg, de albuquerque cfc, de souza vc. PLoS Negl Trop Dis. 2019 Mar 7;13(3):e0007065. doi: 10.1371/journal.pntd.0007065. eCollection 2019 Mar. PLoS Negl Trop Dis. 2019. PMID: 30845267 Free PMC article.
Yellow Fever Virus Reemergence and Spread in Southeast Brazil, 2016-2019.
Giovanetti M, de Mendonça MCL, Fonseca V, Mares-Guia MA, Fabri A, Xavier J, de Jesus JG, Gräf T, Dos Santos Rodrigues CD, Dos Santos CC, Sampaio SA, Chalhoub FLL, de Bruycker Nogueira F, Theze J, Romano APM, Ramos DG, de Abreu AL, Oliveira WK, do Carmo Said RF, de Alburque CFC, de Oliveira T, Fernandes CA, Aguiar SF, Chieppe A, Sequeira PC, Faria NR, Cunha RV, Alcantara LCJ, de Filippis AMB. Giovanetti M, et al. Among authors: de oliveira t, de jesus jg, de mendonca mcl, de abreu al, de filippis amb, de bruycker nogueira f, de alburque cfc. J Virol. 2019 Dec 12;94(1):e01623-19. doi: 10.1128/JVI.01623-19. Print 2019 Dec 12. J Virol. 2019. PMID: 31597773 Free PMC article.
Genomic detection of a virus lineage replacement event of dengue virus serotype 2 in Brazil, 2019.
de Jesus JG, Dutra KR, Sales FCDS, Claro IM, Terzian AC, Candido DDS, Hill SC, Thézé J, Torres C, D'Agostini TL, Felix AC, Reis AFN, Alcantara LCJ, de Abreu AL, Croda JH, de Oliveira WK, de Filipis AMB, Camis MDCRDS, Romano CM. de Jesus JG, et al. Among authors: de abreu al, de oliveira wk, de filipis amb. Mem Inst Oswaldo Cruz. 2020;115:e190423. doi: 10.1590/0074-02760190423. Epub 2020 May 15. Mem Inst Oswaldo Cruz. 2020. PMID: 32428189 Free PMC article.
First case of SARS-COV-2 sequencing in cerebrospinal fluid of a patient with suspected demyelinating disease.
Domingues RB, Mendes-Correa MC, de Moura Leite FBV, Sabino EC, Salarini DZ, Claro I, Santos DW, de Jesus JG, Ferreira NE, Romano CM, Soares CAS. Domingues RB, et al. Among authors: de moura leite fbv, de jesus jg. J Neurol. 2020 Nov;267(11):3154-3156. doi: 10.1007/s00415-020-09996-w. Epub 2020 Jun 20. J Neurol. 2020. PMID: 32564153 Free PMC article.
Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018.
Hill SC, de Souza R, Thézé J, Claro I, Aguiar RS, Abade L, Santos FCP, Cunha MS, Nogueira JS, Salles FCS, Rocco IM, Maeda AY, Vasami FGS, du Plessis L, Silveira PP, de Jesus JG, Quick J, Fernandes NCCA, Guerra JM, Réssio RA, Giovanetti M, Alcantara LCJ, Cirqueira CS, Díaz-Delgado J, Macedo FLL, Timenetsky MDCST, de Paula R, Spinola R, Telles de Deus J, Mucci LF, Tubaki RM, de Menezes RMT, Ramos PL, de Abreu AL, Cruz LN, Loman N, Dellicour S, Pybus OG, Sabino EC, Faria NR. Hill SC, et al. Among authors: de jesus jg, de paula r, de menezes rmt, de souza r, de abreu al. PLoS Pathog. 2020 Aug 7;16(8):e1008699. doi: 10.1371/journal.ppat.1008699. eCollection 2020 Aug. PLoS Pathog. 2020. PMID: 32764827 Free PMC article.
Local Transmission of SARS-CoV-2 Lineage B.1.1.7, Brazil, December 2020.
Claro IM, da Silva Sales FC, Ramundo MS, Candido DS, Silva CAM, de Jesus JG, Manuli ER, de Oliveira CM, Scarpelli L, Campana G, Pybus OG, Sabino EC, Faria NR, Levi JE. Claro IM, et al. Among authors: de oliveira cm, de jesus jg. Emerg Infect Dis. 2021 Mar;27(3):970-972. doi: 10.3201/eid2703.210038. Epub 2021 Jan 26. Emerg Infect Dis. 2021. PMID: 33496249 Free PMC article.
Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus, Brazil.
Faria NR, Mellan TA, Whittaker C, Claro IM, Candido DDS, Mishra S, Crispim MAE, Sales FC, Hawryluk I, McCrone JT, Hulswit RJG, Franco LAM, Ramundo MS, de Jesus JG, Andrade PS, Coletti TM, Ferreira GM, Silva CAM, Manuli ER, Pereira RHM, Peixoto PS, Kraemer MU, Gaburo N Jr, Camilo CDC, Hoeltgebaum H, Souza WM, Rocha EC, de Souza LM, de Pinho MC, Araujo LJT, Malta FSV, de Lima AB, Silva JDP, Zauli DAG, de S Ferreira AC, Schnekenberg RP, Laydon DJ, Walker PGT, Schlüter HM, Dos Santos ALP, Vidal MS, Del Caro VS, Filho RMF, Dos Santos HM, Aguiar RS, Modena JLP, Nelson B, Hay JA, Monod M, Miscouridou X, Coupland H, Sonabend R, Vollmer M, Gandy A, Suchard MA, Bowden TA, Pond SLK, Wu CH, Ratmann O, Ferguson NM, Dye C, Loman NJ, Lemey P, Rambaut A, Fraiji NA, Carvalho MDPSS, Pybus OG, Flaxman S, Bhatt S, Sabino EC. Faria NR, et al. Among authors: de lima ab, de souza lm, de jesus jg, de s ferreira ac, de pinho mc. medRxiv [Preprint]. 2021 Mar 3:2021.02.26.21252554. doi: 10.1101/2021.02.26.21252554. medRxiv. 2021. PMID: 33688664 Free PMC article. Updated. Preprint.
37 results