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SignalP 6.0 predicts all five types of signal peptides using protein language models.
Teufel F, Almagro Armenteros JJ, Johansen AR, Gíslason MH, Pihl SI, Tsirigos KD, Winther O, Brunak S, von Heijne G, Nielsen H. Teufel F, et al. Among authors: von heijne g. Nat Biotechnol. 2022 Jul;40(7):1023-1025. doi: 10.1038/s41587-021-01156-3. Epub 2022 Jan 3. Nat Biotechnol. 2022. PMID: 34980915 Free PMC article.
SignalP 5.0 improves signal peptide predictions using deep neural networks.
Almagro Armenteros JJ, Tsirigos KD, Sønderby CK, Petersen TN, Winther O, Brunak S, von Heijne G, Nielsen H. Almagro Armenteros JJ, et al. Among authors: von heijne g. Nat Biotechnol. 2019 Apr;37(4):420-423. doi: 10.1038/s41587-019-0036-z. Epub 2019 Feb 18. Nat Biotechnol. 2019. PMID: 30778233
Improved prediction of signal peptides: SignalP 3.0.
Bendtsen JD, Nielsen H, von Heijne G, Brunak S. Bendtsen JD, et al. Among authors: von heijne g. J Mol Biol. 2004 Jul 16;340(4):783-95. doi: 10.1016/j.jmb.2004.05.028. J Mol Biol. 2004. PMID: 15223320
A Brief History of Protein Sorting Prediction.
Nielsen H, Tsirigos KD, Brunak S, von Heijne G. Nielsen H, et al. Among authors: von heijne g. Protein J. 2019 Jun;38(3):200-216. doi: 10.1007/s10930-019-09838-3. Protein J. 2019. PMID: 31119599 Free PMC article. Review.
356 results