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Orchestrating high-throughput genomic analysis with Bioconductor.
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Huber W, et al. Among authors: carlson m. Nat Methods. 2015 Feb;12(2):115-21. doi: 10.1038/nmeth.3252. Nat Methods. 2015. PMID: 25633503 Free PMC article. Review.
Genomic Annotation Resources in R/Bioconductor.
Carlson MR, Pagès H, Arora S, Obenchain V, Morgan M. Carlson MR, et al. Methods Mol Biol. 2016;1418:67-90. doi: 10.1007/978-1-4939-3578-9_4. Methods Mol Biol. 2016. PMID: 27008010
Software for computing and annotating genomic ranges.
Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, Gentleman R, Morgan MT, Carey VJ. Lawrence M, et al. Among authors: carlson m. PLoS Comput Biol. 2013;9(8):e1003118. doi: 10.1371/journal.pcbi.1003118. Epub 2013 Aug 8. PLoS Comput Biol. 2013. PMID: 23950696 Free PMC article.
Uncovering microstructural architecture from histology.
Georgiadis M, Auf der Heiden F, Abbasi H, Ettema L, Nirschl J, Taghavi HM, Wakatsuki M, Liu A, Ho WHD, Carlson M, Doukas M, Koppes SA, Keereweer S, Sobel RA, Setsompop K, Liao C, Amunts K, Axer M, Zeineh M, Menzel M. Georgiadis M, et al. Among authors: carlson m. bioRxiv [Preprint]. 2024 Mar 29:2024.03.26.586745. doi: 10.1101/2024.03.26.586745. bioRxiv. 2024. PMID: 38585744 Free PMC article. Preprint.
2,004 results