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Orchestrating high-throughput genomic analysis with Bioconductor.
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Huber W, et al. Among authors: morgan m. Nat Methods. 2015 Feb;12(2):115-21. doi: 10.1038/nmeth.3252. Nat Methods. 2015. PMID: 25633503 Free PMC article. Review.
GGtools: analysis of genetics of gene expression in bioconductor.
Carey VJ, Morgan M, Falcon S, Lazarus R, Gentleman R. Carey VJ, et al. Among authors: morgan m. Bioinformatics. 2007 Feb 15;23(4):522-3. doi: 10.1093/bioinformatics/btl628. Epub 2006 Dec 8. Bioinformatics. 2007. PMID: 17158513 Review.
Software for computing and annotating genomic ranges.
Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, Gentleman R, Morgan MT, Carey VJ. Lawrence M, et al. Among authors: morgan mt. PLoS Comput Biol. 2013;9(8):e1003118. doi: 10.1371/journal.pcbi.1003118. Epub 2013 Aug 8. PLoS Comput Biol. 2013. PMID: 23950696 Free PMC article.
Public data and open source tools for multi-assay genomic investigation of disease.
Kannan L, Ramos M, Re A, El-Hachem N, Safikhani Z, Gendoo DM, Davis S, Gomez-Cabrero D, Castelo R, Hansen KD, Carey VJ, Morgan M, Culhane AC, Haibe-Kains B, Waldron L. Kannan L, et al. Among authors: morgan m. Brief Bioinform. 2016 Jul;17(4):603-15. doi: 10.1093/bib/bbv080. Epub 2015 Oct 12. Brief Bioinform. 2016. PMID: 26463000 Free PMC article. Review.
The Bioconductor channel in F1000Research.
Huber W, Carey V, Davis S, Hansen KD, Morgan M. Huber W, et al. Among authors: morgan m. F1000Res. 2015 Jul 10;4:217. doi: 10.12688/f1000research.6758.2. eCollection 2015. F1000Res. 2015. PMID: 26998224 Free PMC article.
Genomic Annotation Resources in R/Bioconductor.
Carlson MR, Pagès H, Arora S, Obenchain V, Morgan M. Carlson MR, et al. Among authors: morgan m. Methods Mol Biol. 2016;1418:67-90. doi: 10.1007/978-1-4939-3578-9_4. Methods Mol Biol. 2016. PMID: 27008010
Scalable Genomics with R and Bioconductor.
Lawrence M, Morgan M. Lawrence M, et al. Among authors: morgan m. Stat Sci. 2014 May;29(2):214-226. doi: 10.1214/14-STS476. Epub 2014 Aug 18. Stat Sci. 2014. PMID: 28018047 Free PMC article.
Accessible, curated metagenomic data through ExperimentHub.
Pasolli E, Schiffer L, Manghi P, Renson A, Obenchain V, Truong DT, Beghini F, Malik F, Ramos M, Dowd JB, Huttenhower C, Morgan M, Segata N, Waldron L. Pasolli E, et al. Among authors: morgan m. Nat Methods. 2017 Oct 31;14(11):1023-1024. doi: 10.1038/nmeth.4468. Nat Methods. 2017. PMID: 29088129 Free PMC article. No abstract available.
5,037 results